Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 TUBB8P6-201ENST00000436895 1288 ntBASIC20.53■□□□□ 0.88
TRIM11Q96F44 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM11Q96F44 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM11Q96F44 AC141586.3-201ENST00000562166 1838 ntBASIC20.53■□□□□ 0.88
TRIM11Q96F44 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM11Q96F44 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM11Q96F44 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM11Q96F44 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 TNXA-203ENST00000507684 2038 ntBASIC20.51■□□□□ 0.87
TRIM11Q96F44 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM11Q96F44 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM11Q96F44 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM11Q96F44 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM11Q96F44 AL355802.2-201ENST00000402069 882 ntBASIC20.5■□□□□ 0.87
TRIM11Q96F44 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM11Q96F44 POM121L13P-201ENST00000422362 380 ntBASIC20.5■□□□□ 0.87
TRIM11Q96F44 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM11Q96F44 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM11Q96F44 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM11Q96F44 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TRIM11Q96F44 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 AC104417.2-201ENST00000562989 1793 ntBASIC20.49■□□□□ 0.87
TRIM11Q96F44 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 UNC93B5-201ENST00000530315 699 ntBASIC20.49■□□□□ 0.87
TRIM11Q96F44 PRKY-204ENST00000533551 1019 ntBASIC20.49■□□□□ 0.87
TRIM11Q96F44 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM11Q96F44 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM11Q96F44 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms