Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLNQ969V3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.81■□□□□ 0.6
NCLNQ969V3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLNQ969V3 TNXA-203ENST00000507684 2038 ntBASIC18.81■□□□□ 0.6
NCLNQ969V3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLNQ969V3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
NCLNQ969V3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.8■□□□□ 0.6
NCLNQ969V3 HTR7P1-202ENST00000624664 4411 ntBASIC18.8■□□□□ 0.6
NCLNQ969V3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NCLNQ969V3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.8■□□□□ 0.6
NCLNQ969V3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
NCLNQ969V3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.8■□□□□ 0.6
NCLNQ969V3 UNC93B5-201ENST00000530315 699 ntBASIC18.8■□□□□ 0.6
NCLNQ969V3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.8■□□□□ 0.6
NCLNQ969V3 TREX1-205ENST00000625293 1783 ntBASIC18.8■□□□□ 0.6
NCLNQ969V3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.8■□□□□ 0.6
NCLNQ969V3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NCLNQ969V3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLNQ969V3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
NCLNQ969V3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NCLNQ969V3 AC004408.2-201ENST00000623613 2777 ntBASIC18.79■□□□□ 0.6
NCLNQ969V3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.79■□□□□ 0.6
NCLNQ969V3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NCLNQ969V3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 ABHD17AP1-201ENST00000358206 933 ntBASIC18.79■□□□□ 0.6
NCLNQ969V3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.79■□□□□ 0.6
NCLNQ969V3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.79■□□□□ 0.6
NCLNQ969V3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
NCLNQ969V3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
NCLNQ969V3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLNQ969V3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.78■□□□□ 0.6
NCLNQ969V3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NCLNQ969V3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLNQ969V3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLNQ969V3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.78■□□□□ 0.6
NCLNQ969V3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
NCLNQ969V3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
NCLNQ969V3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLNQ969V3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLNQ969V3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NCLNQ969V3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NCLNQ969V3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.77■□□□□ 0.6
NCLNQ969V3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.77■□□□□ 0.6
NCLNQ969V3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 FAM201B-201ENST00000458407 597 ntBASIC18.77■□□□□ 0.6
NCLNQ969V3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.77■□□□□ 0.6
NCLNQ969V3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NCLNQ969V3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCLNQ969V3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms