Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SHC3Q92529 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 AC141586.3-201ENST00000562166 1838 ntBASIC20.74■□□□□ 0.91
SHC3Q92529 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.73■□□□□ 0.91
SHC3Q92529 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SHC3Q92529 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC3Q92529 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC3Q92529 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.73■□□□□ 0.91
SHC3Q92529 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.73■□□□□ 0.91
SHC3Q92529 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SHC3Q92529 AL023875.1-201ENST00000640777 796 ntBASIC20.73■□□□□ 0.91
SHC3Q92529 AC073648.6-201ENST00000641589 218 ntBASIC20.73■□□□□ 0.91
SHC3Q92529 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.73■□□□□ 0.91
SHC3Q92529 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.73■□□□□ 0.91
SHC3Q92529 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SHC3Q92529 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SHC3Q92529 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.73■□□□□ 0.91
SHC3Q92529 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SHC3Q92529 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC3Q92529 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC3Q92529 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SHC3Q92529 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SHC3Q92529 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC3Q92529 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.72■□□□□ 0.91
SHC3Q92529 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
SHC3Q92529 RN7SL471P-201ENST00000580476 299 ntBASIC20.72■□□□□ 0.91
SHC3Q92529 AC006058.3-201ENST00000606217 1069 ntBASIC20.72■□□□□ 0.91
SHC3Q92529 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC3Q92529 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC3Q92529 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC3Q92529 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SHC3Q92529 AC098818.2-201ENST00000564925 2320 ntBASIC20.72■□□□□ 0.91
SHC3Q92529 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SHC3Q92529 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 AP000974.1-201ENST00000623909 2387 ntBASIC20.72■□□□□ 0.91
SHC3Q92529 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC3Q92529 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SHC3Q92529 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.71■□□□□ 0.91
SHC3Q92529 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SHC3Q92529 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.71■□□□□ 0.91
SHC3Q92529 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
SHC3Q92529 KRASP1-201ENST00000407852 552 ntBASIC20.71■□□□□ 0.91
SHC3Q92529 AC239809.2-201ENST00000415381 517 ntBASIC20.71■□□□□ 0.91
SHC3Q92529 AC133681.1-201ENST00000465482 601 ntBASIC20.71■□□□□ 0.91
SHC3Q92529 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.71■□□□□ 0.91
SHC3Q92529 AC004264.1-201ENST00000608354 794 ntBASIC20.71■□□□□ 0.91
SHC3Q92529 AC124016.1-201ENST00000609552 612 ntBASIC20.71■□□□□ 0.91
SHC3Q92529 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SHC3Q92529 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC3Q92529 AC087289.5-201ENST00000586076 3175 ntBASIC20.71■□□□□ 0.91
SHC3Q92529 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SHC3Q92529 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.7■□□□□ 0.9
SHC3Q92529 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.7■□□□□ 0.9
SHC3Q92529 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.7■□□□□ 0.9
SHC3Q92529 POU5F1P3-201ENST00000428824 1078 ntBASIC20.7■□□□□ 0.9
SHC3Q92529 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.7■□□□□ 0.9
SHC3Q92529 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.7■□□□□ 0.9
SHC3Q92529 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.7■□□□□ 0.9
SHC3Q92529 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SHC3Q92529 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SHC3Q92529 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC3Q92529 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SHC3Q92529 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.7■□□□□ 0.9
SHC3Q92529 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms