Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 AC008622.2-201ENST00000617006 1229 ntBASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC30.26■■■□□ 2.43
CASKIN1Q8WXD9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 ANKRD20A18P-201ENST00000359341 492 ntBASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 AL031133.1-201ENST00000406807 723 ntBASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CASKIN1Q8WXD9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CASKIN1Q8WXD9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 LINC01238-205ENST00000567549 1107 ntBASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
CASKIN1Q8WXD9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 MIR4674-201ENST00000582457 87 ntBASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 KRT8P45-201ENST00000414328 1447 ntBASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 TSPY5P-201ENST00000426936 936 ntBASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 AL441883.1-201ENST00000566170 1045 ntBASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CASKIN1Q8WXD9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 AL512604.3-201ENST00000569583 964 ntBASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 AC011558.1-201ENST00000623459 338 ntBASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CASKIN1Q8WXD9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms