Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNIH3Q8TBE1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 AC091305.1-201ENST00000479476 895 ntBASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNIH3Q8TBE1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 AC019069.1-201ENST00000610008 1333 ntBASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 Z98044.1-201ENST00000632503 1764 ntBASIC17.74■□□□□ 0.43
CNIH3Q8TBE1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 AL136967.2-201ENST00000623968 743 ntBASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CNIH3Q8TBE1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 AC093525.10-201ENST00000625130 1569 ntBASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.72■□□□□ 0.43
CNIH3Q8TBE1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms