Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01006Q8NI28 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 AP003041.3-201ENST00000527151 707 ntBASIC15.13■□□□□ 0.01
LINC01006Q8NI28 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01006Q8NI28 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.12■□□□□ 0.01
LINC01006Q8NI28 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 AL121956.5-201ENST00000625261 221 ntBASIC15.12■□□□□ 0.01
LINC01006Q8NI28 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01006Q8NI28 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 PCED1CP-201ENST00000419887 785 ntBASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AL441883.1-201ENST00000566170 1045 ntBASIC15.11■□□□□ 0.01
LINC01006Q8NI28 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AL023973.1-201ENST00000624619 620 ntBASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01006Q8NI28 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms