Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 HLA-G-203ENST00000376818 1127 ntBASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 AL512625.2-201ENST00000417533 625 ntBASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
DNAAF1Q8NEP3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 AL162430.1-201ENST00000480705 870 ntBASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DNAAF1Q8NEP3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNAAF1Q8NEP3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 AC010980.2-201ENST00000587099 1412 ntBASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms