Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 AL512353.2-201ENST00000448759 1962 ntBASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC197Q8NCU1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 PRORSD1P-202ENST00000563365 2154 ntBASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 ABALON-201ENST00000629058 1903 ntBASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC197Q8NCU1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC197Q8NCU1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.27■□□□□ 0.67
CCDC197Q8NCU1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC197Q8NCU1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 KRT8P17-201ENST00000453110 1448 ntBASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC197Q8NCU1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC197Q8NCU1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 AC009299.2-201ENST00000482477 511 ntBASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 PTBP1P-201ENST00000554374 1601 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms