Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 AL160286.2-201ENST00000567150 934 ntBASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 AC026271.3-201ENST00000571884 352 ntBASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 AL031985.4-201ENST00000642138 673 ntBASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAM1L1Q8N609 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAM1L1Q8N609 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 AL596275.1-201ENST00000423464 877 ntBASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 TSPY7P-201ENST00000431358 1114 ntBASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 NUDT16P1-203ENST00000513809 620 ntBASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 MIR4785-201ENST00000585005 73 ntBASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 AL158211.5-201ENST00000623583 2518 ntBASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 AC104417.2-201ENST00000562989 1793 ntBASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAM1L1Q8N609 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 AL355355.2-201ENST00000442321 338 ntBASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 AC026471.5-201ENST00000615068 467 ntBASIC19.2■□□□□ 0.66
TRAM1L1Q8N609 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms