Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 AL355355.2-201ENST00000442321 338 ntBASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 AC131212.4-201ENST00000623606 975 ntBASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ARHGEF39Q8N4T4 AC104417.2-201ENST00000562989 1793 ntBASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 AC008040.2-201ENST00000461049 708 ntBASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 AL160286.2-201ENST00000567150 934 ntBASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 RCC2P6-201ENST00000526625 1557 ntBASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARHGEF39Q8N4T4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 ZNF815P-204ENST00000434898 1737 ntBASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 KRT8P41-201ENST00000533985 1514 ntBASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 MIR6786-201ENST00000616843 113 ntBASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF39Q8N4T4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 RBM17P1-201ENST00000453646 1190 ntBASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 AC130371.2-201ENST00000619443 611 ntBASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ARHGEF39Q8N4T4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 AC079598.2-202ENST00000546624 1451 ntBASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms