Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.9■□□□□ 0.78
SIX5Q8N196 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SIX5Q8N196 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SIX5Q8N196 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SIX5Q8N196 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIX5Q8N196 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIX5Q8N196 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIX5Q8N196 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SIX5Q8N196 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIX5Q8N196 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SIX5Q8N196 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SIX5Q8N196 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.89■□□□□ 0.77
SIX5Q8N196 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.89■□□□□ 0.77
SIX5Q8N196 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SIX5Q8N196 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.89■□□□□ 0.77
SIX5Q8N196 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.89■□□□□ 0.77
SIX5Q8N196 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.89■□□□□ 0.77
SIX5Q8N196 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.89■□□□□ 0.77
SIX5Q8N196 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SIX5Q8N196 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SIX5Q8N196 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.88■□□□□ 0.77
SIX5Q8N196 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SIX5Q8N196 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SIX5Q8N196 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.88■□□□□ 0.77
SIX5Q8N196 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.88■□□□□ 0.77
SIX5Q8N196 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 AC112907.2-201ENST00000448639 330 ntBASIC19.88■□□□□ 0.77
SIX5Q8N196 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.88■□□□□ 0.77
SIX5Q8N196 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SIX5Q8N196 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.88■□□□□ 0.77
SIX5Q8N196 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SIX5Q8N196 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SIX5Q8N196 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIX5Q8N196 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SIX5Q8N196 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.87■□□□□ 0.77
SIX5Q8N196 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 AC246785.2-201ENST00000432512 513 ntBASIC19.87■□□□□ 0.77
SIX5Q8N196 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.87■□□□□ 0.77
SIX5Q8N196 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.87■□□□□ 0.77
SIX5Q8N196 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.87■□□□□ 0.77
SIX5Q8N196 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 ZNF444P1-201ENST00000559497 298 ntBASIC19.87■□□□□ 0.77
SIX5Q8N196 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.87■□□□□ 0.77
SIX5Q8N196 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.87■□□□□ 0.77
SIX5Q8N196 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.87■□□□□ 0.77
SIX5Q8N196 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX5Q8N196 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.86■□□□□ 0.77
SIX5Q8N196 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.86■□□□□ 0.77
SIX5Q8N196 AP003041.3-201ENST00000527151 707 ntBASIC19.86■□□□□ 0.77
SIX5Q8N196 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.86■□□□□ 0.77
SIX5Q8N196 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SIX5Q8N196 PHGDH-210ENST00000641115 1638 ntBASIC19.86■□□□□ 0.77
SIX5Q8N196 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.86■□□□□ 0.77
SIX5Q8N196 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX5Q8N196 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SIX5Q8N196 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIX5Q8N196 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
SIX5Q8N196 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIX5Q8N196 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX5Q8N196 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms