Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.95■□□□□ 0.78
CDKL3Q8IVW4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 UNC93B4-201ENST00000505679 747 ntBASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 KRT18P16-201ENST00000510337 1294 ntBASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 LINC01465-201ENST00000408887 1940 ntBASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDKL3Q8IVW4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDKL3Q8IVW4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 TNXA-203ENST00000507684 2038 ntBASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 HLA-L-209ENST00000420110 1011 ntBASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDKL3Q8IVW4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL3Q8IVW4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms