Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 AL031598.1-201ENST00000561511 1773 ntBASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 AC061975.6-201ENST00000579045 1553 ntBASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 PCDHA12-202ENST00000613593 2588 ntBASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CROCCP3Q8IVE0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CROCCP3Q8IVE0 BX119927.1-201ENST00000636596 1552 ntBASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 AC046158.3-201ENST00000624947 2558 ntBASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 ABALON-201ENST00000629058 1903 ntBASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 Z98044.1-201ENST00000632503 1764 ntBASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CROCCP3Q8IVE0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 POU5F1P4-201ENST00000413175 1085 ntBASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms