Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 AC008622.2-201ENST00000617006 1229 ntBASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 AL671277.2-201ENST00000458060 996 ntBASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 AL359075.1-203ENST00000462729 1002 ntBASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 PRSS44-201ENST00000515154 1146 ntBASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 AC009237.14-201ENST00000609975 1594 ntBASIC20.85■□□□□ 0.93
NPAS4Q8IUM7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 KRT8P45-201ENST00000414328 1447 ntBASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.84■□□□□ 0.93
NPAS4Q8IUM7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 AP000523.1-201ENST00000398242 1049 ntBASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
NPAS4Q8IUM7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.83■□□□□ 0.92
NPAS4Q8IUM7 IER3-202ENST00000376377 1350 ntBASIC20.83■□□□□ 0.92
NPAS4Q8IUM7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPAS4Q8IUM7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 KRT8P11-201ENST00000409686 1436 ntBASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 KRT18P56-201ENST00000507275 550 ntBASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms