Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 PRSS44-201ENST00000515154 1146 ntBASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 RN7SL510P-201ENST00000581311 263 ntBASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 AL732292.2-201ENST00000609649 430 ntBASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 AC139530.3-201ENST00000620344 690 ntBASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
VPS13BQ7Z7G8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13BQ7Z7G8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 NPAP1P7-201ENST00000613027 823 ntBASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.01□□□□□ -0.49
VPS13BQ7Z7G8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms