Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF44Q7L0R7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF44Q7L0R7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF44Q7L0R7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF44Q7L0R7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF44Q7L0R7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.64■□□□□ 0.58
RNF44Q7L0R7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 AL596275.1-201ENST00000423464 877 ntBASIC18.64■□□□□ 0.57
RNF44Q7L0R7 KSR1P1-201ENST00000446298 240 ntBASIC18.64■□□□□ 0.57
RNF44Q7L0R7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 AL445675.2-201ENST00000620291 557 ntBASIC18.64■□□□□ 0.57
RNF44Q7L0R7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF44Q7L0R7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 SNORA78-201ENST00000459373 127 ntBASIC18.63■□□□□ 0.57
RNF44Q7L0R7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 MIR4497-201ENST00000583208 89 ntBASIC18.63■□□□□ 0.57
RNF44Q7L0R7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF44Q7L0R7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 CD177P1-201ENST00000606252 935 ntBASIC18.62■□□□□ 0.57
RNF44Q7L0R7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 HLA-A-209ENST00000638375 975 ntBASIC18.62■□□□□ 0.57
RNF44Q7L0R7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF44Q7L0R7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF44Q7L0R7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms