Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.29□□□□□ -0.121e-21■■□□□ 13.8
SND1Q7KZF4 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.351e-21■■□□□ 13.8
SND1Q7KZF4 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC12.35□□□□□ -0.431e-21■■□□□ 13.8
SND1Q7KZF4 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.481e-21■■□□□ 13.8
SND1Q7KZF4 OCIAD1-224ENST00000512236 594 ntTSL 39.66□□□□□ -0.863e-7■■□□□ 13.8
SND1Q7KZF4 OCIAD1-218ENST00000509246 495 ntTSL 26.27□□□□□ -1.413e-7■■□□□ 13.8
SND1Q7KZF4 OCIAD1-222ENST00000511102 688 ntTSL 24.82□□□□□ -1.643e-7■■□□□ 13.8
SND1Q7KZF4 APP-213ENST00000464867 816 ntTSL 1 (best)9.8□□□□□ -0.841e-17■■□□□ 13.8
SND1Q7KZF4 FBLN1-211ENST00000451475 544 ntTSL 516■□□□□ 0.153e-8■■□□□ 13.8
SND1Q7KZF4 EFTUD2-217ENST00000590124 899 ntTSL 320.54■□□□□ 0.883e-9■■□□□ 13.8
SND1Q7KZF4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.782e-6■■□□□ 13.8
SND1Q7KZF4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.672e-6■■□□□ 13.8
SND1Q7KZF4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.28■□□□□ 0.362e-9■■□□□ 13.8
SND1Q7KZF4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-6■■□□□ 13.8
SND1Q7KZF4 EFTUD2-214ENST00000589769 689 ntTSL 315.74■□□□□ 0.113e-9■■□□□ 13.8
SND1Q7KZF4 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.453e-9■■□□□ 13.8
SND1Q7KZF4 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC10.22□□□□□ -0.773e-9■■□□□ 13.8
SND1Q7KZF4 EFTUD2-219ENST00000590977 2422 ntTSL 210.15□□□□□ -0.793e-9■■□□□ 13.8
SND1Q7KZF4 CLTC-203ENST00000466513 793 ntTSL 29.65□□□□□ -0.862e-9■■□□□ 13.8
SND1Q7KZF4 EFTUD2-205ENST00000586276 3678 ntTSL 29.61□□□□□ -0.873e-9■■□□□ 13.8
SND1Q7KZF4 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC9.52□□□□□ -0.883e-9■■□□□ 13.8
SND1Q7KZF4 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.013e-9■■□□□ 13.8
SND1Q7KZF4 EFTUD2-218ENST00000590367 3638 ntTSL 28.57□□□□□ -1.043e-9■■□□□ 13.8
SND1Q7KZF4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.612e-9■■□□□ 13.8
SND1Q7KZF4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.028e-10■■□□□ 13.8
SND1Q7KZF4 GDI2-206ENST00000456041 918 ntTSL 512.51□□□□□ -0.418e-10■■□□□ 13.8
SND1Q7KZF4 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC11.79□□□□□ -0.528e-10■■□□□ 13.8
SND1Q7KZF4 GDI2-205ENST00000447751 834 ntTSL 36.82□□□□□ -1.328e-10■■□□□ 13.8
SND1Q7KZF4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.187e-7■■□□□ 13.8
SND1Q7KZF4 ATP5C1-210ENST00000493053 1096 ntTSL 516.7■□□□□ 0.267e-7■■□□□ 13.8
SND1Q7KZF4 ATP5C1-206ENST00000465936 292 ntTSL 316.42■□□□□ 0.227e-7■■□□□ 13.8
SND1Q7KZF4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.147e-7■■□□□ 13.8
SND1Q7KZF4 ATP5C1-204ENST00000460820 622 ntTSL 212.31□□□□□ -0.447e-7■■□□□ 13.8
SND1Q7KZF4 TK1-202ENST00000586613 631 ntTSL 317.77■□□□□ 0.441e-13■■□□□ 13.8
SND1Q7KZF4 MARCH6-205ENST00000505253 676 ntTSL 310.48□□□□□ -0.737e-9■■□□□ 13.8
SND1Q7KZF4 MARCH6-212ENST00000514312 253 ntTSL 210.07□□□□□ -0.87e-9■■□□□ 13.8
SND1Q7KZF4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.49■□□□□ 0.713e-23■■□□□ 13.8
SND1Q7KZF4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.38e-8■■□□□ 13.8
SND1Q7KZF4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.218e-8■■□□□ 13.8
SND1Q7KZF4 GGT1-213ENST00000425895 2632 ntTSL 215.77■□□□□ 0.128e-8■■□□□ 13.8
SND1Q7KZF4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.038e-8■■□□□ 13.8
SND1Q7KZF4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.873e-7■■□□□ 13.8
SND1Q7KZF4 GDI2-204ENST00000418688 636 ntTSL 511.77□□□□□ -0.533e-11■■□□□ 13.8
SND1Q7KZF4 RRBP1-211ENST00000620641 582 ntTSL 216.15■□□□□ 0.181e-9■■□□□ 13.8
SND1Q7KZF4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.482e-23■■□□□ 13.8
SND1Q7KZF4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.28■□□□□ 0.842e-23■■□□□ 13.8
SND1Q7KZF4 AC011448.1-202ENST00000586674 1071 ntTSL 219.65■□□□□ 0.742e-23■■□□□ 13.8
SND1Q7KZF4 NDUFA13-202ENST00000502506 1166 ntTSL 216.48■□□□□ 0.232e-23■■□□□ 13.8
SND1Q7KZF4 NDUFA13-207ENST00000606722 502 ntTSL 313.21□□□□□ -0.292e-23■■□□□ 13.8
SND1Q7KZF4 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.472e-23■■□□□ 13.8
SND1Q7KZF4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.042e-6■■□□□ 13.7
SND1Q7KZF4 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.842e-6■■□□□ 13.7
SND1Q7KZF4 TMEM2-210ENST00000542935 5372 ntTSL 1 (best)8.61□□□□□ -1.032e-6■■□□□ 13.7
SND1Q7KZF4 GRN-221ENST00000593167 763 ntTSL 521.36■■□□□ 1.015e-14■■□□□ 13.7
SND1Q7KZF4 FN1-223ENST00000490833 699 ntTSL 36.82□□□□□ -1.328e-7■■□□□ 13.7
SND1Q7KZF4 H2AFZ-202ENST00000511203 1880 ntTSL 230.98■■■□□ 2.552e-14■■□□□ 13.7
SND1Q7KZF4 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)30.01■■■□□ 2.392e-14■■□□□ 13.7
SND1Q7KZF4 DDIT4-202ENST00000471240 521 ntTSL 222.18■■□□□ 1.145e-17■■□□□ 13.7
SND1Q7KZF4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-14■■□□□ 13.7
SND1Q7KZF4 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)14.52□□□□□ -0.092e-14■■□□□ 13.7
SND1Q7KZF4 H2AFZ-205ENST00000527366 435 ntTSL 312.87□□□□□ -0.352e-14■■□□□ 13.7
SND1Q7KZF4 H2AFZ-206ENST00000529158 726 ntTSL 310.36□□□□□ -0.752e-14■■□□□ 13.7
SND1Q7KZF4 CPZ-205ENST00000506287 906 ntTSL 322.2■■□□□ 1.142e-6■■□□□ 13.7
SND1Q7KZF4 CPZ-207ENST00000514602 692 ntTSL 221.9■■□□□ 1.12e-6■■□□□ 13.7
SND1Q7KZF4 CPZ-204ENST00000504070 583 ntTSL 419.89■□□□□ 0.772e-6■■□□□ 13.7
SND1Q7KZF4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.742e-6■■□□□ 13.7
SND1Q7KZF4 PHGDH-234ENST00000642041 943 nt17.83■□□□□ 0.442e-7■■□□□ 13.7
SND1Q7KZF4 SPNS1-205ENST00000561868 441 ntTSL 516.14■□□□□ 0.172e-6■■□□□ 13.7
SND1Q7KZF4 PIGS-205ENST00000484580 919 ntTSL 315.96■□□□□ 0.152e-6■■□□□ 13.7
SND1Q7KZF4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.72■□□□□ 0.112e-6■■□□□ 13.7
SND1Q7KZF4 KDM5B-201ENST00000235790 4418 ntTSL 215.59■□□□□ 0.092e-6■■□□□ 13.7
SND1Q7KZF4 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.222e-6■■□□□ 13.7
SND1Q7KZF4 PHGDH-221ENST00000641573 1180 nt13.6□□□□□ -0.232e-7■■□□□ 13.7
SND1Q7KZF4 SEL1L3-208ENST00000512286 739 ntTSL 212.36□□□□□ -0.432e-6■■□□□ 13.7
SND1Q7KZF4 SEL1L3-210ENST00000513416 2344 ntTSL 29.98□□□□□ -0.812e-6■■□□□ 13.7
SND1Q7KZF4 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.24□□□□□ -1.092e-6■■□□□ 13.7
SND1Q7KZF4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.99□□□□□ -1.292e-6■■□□□ 13.7
SND1Q7KZF4 KDM5B-209ENST00000498276 560 ntTSL 44.44□□□□□ -1.72e-6■■□□□ 13.7
SND1Q7KZF4 GTSF1-203ENST00000546739 567 ntTSL 48.48□□□□□ -1.054e-8■■□□□ 13.7
SND1Q7KZF4 GTSF1-205ENST00000548538 594 ntTSL 55.89□□□□□ -1.474e-8■■□□□ 13.7
SND1Q7KZF4 COL9A3-214ENST00000490398 496 ntTSL 418.67■□□□□ 0.581e-31■■□□□ 13.7
SND1Q7KZF4 COL9A3-212ENST00000481800 548 ntTSL 418.23■□□□□ 0.511e-31■■□□□ 13.7
SND1Q7KZF4 COL9A3-209ENST00000469852 901 ntTSL 315.33■□□□□ 0.041e-31■■□□□ 13.7
SND1Q7KZF4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.03■□□□□ 0.648e-12■■□□□ 13.7
SND1Q7KZF4 LMNA-222ENST00000508500 848 ntTSL 1 (best)16.65■□□□□ 0.265e-9■■□□□ 13.7
SND1Q7KZF4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.022e-8■■□□□ 13.7
SND1Q7KZF4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.572e-8■■□□□ 13.7
SND1Q7KZF4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.482e-8■■□□□ 13.7
SND1Q7KZF4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.472e-8■■□□□ 13.7
SND1Q7KZF4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.842e-8■■□□□ 13.7
SND1Q7KZF4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.39■□□□□ 0.692e-8■■□□□ 13.7
SND1Q7KZF4 FBLN1-206ENST00000437711 753 ntTSL 515.75■□□□□ 0.113e-8■■□□□ 13.7
SND1Q7KZF4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.118e-9■■□□□ 13.7
SND1Q7KZF4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.92■■■□□ 2.222e-6■■□□□ 13.7
SND1Q7KZF4 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.042e-6■■□□□ 13.7
SND1Q7KZF4 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.12e-6■■□□□ 13.7
SND1Q7KZF4 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC14.26□□□□□ -0.132e-6■■□□□ 13.7
SND1Q7KZF4 PLOD2-206ENST00000475505 480 ntTSL 37.75□□□□□ -1.172e-6■■□□□ 13.7
SND1Q7KZF4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.19□□□□□ -1.92e-6■■□□□ 13.7
SND1Q7KZF4 SDC1-204ENST00000429035 646 ntTSL 314.98□□□□□ -0.013e-8■■□□□ 13.6
Retrieved 100 of 13,567 protein–RNA pairs in 246.6 ms