Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.93■■□□□ 1.1
SHC4Q6S5L8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 UNC93B4-201ENST00000505679 747 ntBASIC21.92■■□□□ 1.1
SHC4Q6S5L8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC4Q6S5L8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.91■■□□□ 1.1
SHC4Q6S5L8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 CROCCP3-202ENST00000420820 1947 ntBASIC21.9■■□□□ 1.1
SHC4Q6S5L8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC4Q6S5L8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.89■■□□□ 1.1
SHC4Q6S5L8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 AL355802.2-201ENST00000402069 882 ntBASIC21.89■■□□□ 1.09
SHC4Q6S5L8 HLA-L-209ENST00000420110 1011 ntBASIC21.89■■□□□ 1.09
SHC4Q6S5L8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.89■■□□□ 1.09
SHC4Q6S5L8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms