Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DCLRE1AQ6PJP8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 AC096733.2-201ENST00000609937 1394 ntBASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DCLRE1AQ6PJP8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
DCLRE1AQ6PJP8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.77■□□□□ 0.91
DCLRE1AQ6PJP8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DCLRE1AQ6PJP8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 MFAP1P1-201ENST00000442257 1255 ntBASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DCLRE1AQ6PJP8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 LINC01465-201ENST00000408887 1940 ntBASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 AL137013.1-201ENST00000432946 1228 ntBASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 SLC25A3P1-201ENST00000443844 931 ntBASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 AC128688.1-201ENST00000487626 519 ntBASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
DCLRE1AQ6PJP8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCLRE1AQ6PJP8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 TCF3P1-201ENST00000423021 1937 ntBASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 AC073508.3-201ENST00000619697 1419 ntBASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 TERF1P1-201ENST00000311003 1181 ntBASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 ECEL1P2-202ENST00000465689 757 ntBASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DCLRE1AQ6PJP8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms