Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 PHGDH-210ENST00000641115 1638 ntBASIC17.66■□□□□ 0.42
NIPAL3Q6P499 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPAL3Q6P499 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.65■□□□□ 0.42
NIPAL3Q6P499 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 CD99P1-205ENST00000527459 561 ntBASIC17.65■□□□□ 0.42
NIPAL3Q6P499 UNC93B5-201ENST00000530315 699 ntBASIC17.65■□□□□ 0.42
NIPAL3Q6P499 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPAL3Q6P499 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.42
NIPAL3Q6P499 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
NIPAL3Q6P499 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
NIPAL3Q6P499 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NIPAL3Q6P499 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NIPAL3Q6P499 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms