Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 AL158211.5-201ENST00000623583 2518 ntBASIC22.09■■□□□ 1.13
PPP4R3AQ6IN85 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 AL353807.1-201ENST00000427475 662 ntBASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.08■■□□□ 1.13
PPP4R3AQ6IN85 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
PPP4R3AQ6IN85 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 AL135905.2-201ENST00000584934 1404 ntBASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
PPP4R3AQ6IN85 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 NIFKP9-201ENST00000419265 221 ntBASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 AF186192.3-201ENST00000583427 947 ntBASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP4R3AQ6IN85 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms