Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RNF220Q5VTB9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 AC016769.1-201ENST00000409132 1010 ntBASIC18.65■□□□□ 0.58
RNF220Q5VTB9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 AC006015.1-201ENST00000429970 570 ntBASIC18.65■□□□□ 0.58
RNF220Q5VTB9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF220Q5VTB9 CYP21A1P-202ENST00000354927 1481 ntBASIC18.65■□□□□ 0.58
RNF220Q5VTB9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 AL356652.1-201ENST00000615962 565 ntBASIC18.64■□□□□ 0.57
RNF220Q5VTB9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF220Q5VTB9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF220Q5VTB9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms