Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF1Q5TC12 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATPAF1Q5TC12 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ATPAF1Q5TC12 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.83■□□□□ 0.28
ATPAF1Q5TC12 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 AC023632.3-201ENST00000521633 145 ntBASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF1Q5TC12 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 AC098934.4-201ENST00000564127 592 ntBASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF1Q5TC12 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 AC083880.1-201ENST00000608266 535 ntBASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 HLA-B-256ENST00000639848 1089 ntBASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 PTBP1P-201ENST00000554374 1601 ntBASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms