Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBR4Q5T4S7 AL121749.1-202ENST00000609313 2153 ntBASIC10.69□□□□□ -0.7
UBR4Q5T4S7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 OR8S1-201ENST00000310194 1080 ntBASIC10.69□□□□□ -0.7
UBR4Q5T4S7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 FAM197Y3-203ENST00000618346 717 ntBASIC10.69□□□□□ -0.7
UBR4Q5T4S7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC10.69□□□□□ -0.7
UBR4Q5T4S7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.68□□□□□ -0.7
UBR4Q5T4S7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 MIR4469-201ENST00000583919 79 ntBASIC10.67□□□□□ -0.7
UBR4Q5T4S7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 ANOS2P-203ENST00000472227 1816 ntBASIC10.67□□□□□ -0.7
UBR4Q5T4S7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBR4Q5T4S7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms