Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPIN4Q56A73 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPIN4Q56A73 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPIN4Q56A73 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPIN4Q56A73 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 POM121L13P-201ENST00000422362 380 ntBASIC18.54■□□□□ 0.56
SPIN4Q56A73 TUBB8P6-201ENST00000436895 1288 ntBASIC18.54■□□□□ 0.56
SPIN4Q56A73 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 UNC93B5-201ENST00000530315 699 ntBASIC18.54■□□□□ 0.56
SPIN4Q56A73 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPIN4Q56A73 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPIN4Q56A73 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SPIN4Q56A73 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.53■□□□□ 0.56
SPIN4Q56A73 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPIN4Q56A73 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SPIN4Q56A73 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPIN4Q56A73 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SPIN4Q56A73 AC141586.3-201ENST00000562166 1838 ntBASIC18.51■□□□□ 0.55
SPIN4Q56A73 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 PRKY-204ENST00000533551 1019 ntBASIC18.51■□□□□ 0.55
SPIN4Q56A73 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.51■□□□□ 0.55
SPIN4Q56A73 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPIN4Q56A73 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPIN4Q56A73 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SPIN4Q56A73 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPIN4Q56A73 AC104417.2-201ENST00000562989 1793 ntBASIC18.5■□□□□ 0.55
SPIN4Q56A73 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.5■□□□□ 0.55
SPIN4Q56A73 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPIN4Q56A73 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPIN4Q56A73 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPIN4Q56A73 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms