Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 AC141586.3-201ENST00000562166 1838 ntBASIC16.68■□□□□ 0.26
AP3S2P59780 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S2P59780 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.68■□□□□ 0.26
AP3S2P59780 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S2P59780 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S2P59780 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3S2P59780 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S2P59780 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S2P59780 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
AP3S2P59780 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3S2P59780 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3S2P59780 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3S2P59780 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3S2P59780 MKRN4P-201ENST00000444706 1521 ntBASIC16.67■□□□□ 0.26
AP3S2P59780 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3S2P59780 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 AC097381.1-201ENST00000429019 1296 ntBASIC16.67■□□□□ 0.26
AP3S2P59780 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.67■□□□□ 0.26
AP3S2P59780 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3S2P59780 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
AP3S2P59780 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
AP3S2P59780 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
AP3S2P59780 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.66■□□□□ 0.26
AP3S2P59780 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
AP3S2P59780 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
AP3S2P59780 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
AP3S2P59780 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3S2P59780 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.66■□□□□ 0.26
AP3S2P59780 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
AP3S2P59780 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 AC105265.2-201ENST00000467189 838 ntBASIC16.66■□□□□ 0.26
AP3S2P59780 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.66■□□□□ 0.26
AP3S2P59780 MIR4767-201ENST00000582827 78 ntBASIC16.66■□□□□ 0.26
AP3S2P59780 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3S2P59780 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP3S2P59780 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S2P59780 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms