Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDH11P55287 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH11P55287 AL031963.3-201ENST00000606441 850 ntBASIC17.77■□□□□ 0.44
CDH11P55287 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH11P55287 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDH11P55287 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH11P55287 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH11P55287 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH11P55287 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.77■□□□□ 0.43
CDH11P55287 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH11P55287 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH11P55287 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH11P55287 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CDH11P55287 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 KRT18P29-201ENST00000397031 1267 ntBASIC17.76■□□□□ 0.43
CDH11P55287 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.76■□□□□ 0.43
CDH11P55287 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH11P55287 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH11P55287 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH11P55287 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH11P55287 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDH11P55287 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDH11P55287 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH11P55287 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH11P55287 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH11P55287 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH11P55287 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH11P55287 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH11P55287 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH11P55287 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH11P55287 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH11P55287 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH11P55287 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH11P55287 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
CDH11P55287 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH11P55287 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH11P55287 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 KRT8P20-201ENST00000423953 1409 ntBASIC17.74■□□□□ 0.43
CDH11P55287 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDH11P55287 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH11P55287 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH11P55287 ITM2C-210ENST00000620962 501 ntBASIC17.74■□□□□ 0.43
CDH11P55287 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDH11P55287 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH11P55287 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH11P55287 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH11P55287 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms