Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.75■■□□□ 1.39
PDE1AP54750 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE1AP54750 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE1AP54750 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
PDE1AP54750 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE1AP54750 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.75■■□□□ 1.39
PDE1AP54750 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.74■■□□□ 1.39
PDE1AP54750 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.74■■□□□ 1.39
PDE1AP54750 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.74■■□□□ 1.39
PDE1AP54750 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 AC239809.2-201ENST00000415381 517 ntBASIC23.74■■□□□ 1.39
PDE1AP54750 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PDE1AP54750 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.74■■□□□ 1.39
PDE1AP54750 AC133681.1-201ENST00000465482 601 ntBASIC23.74■■□□□ 1.39
PDE1AP54750 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
PDE1AP54750 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 C1QL1P1-201ENST00000568105 661 ntBASIC23.74■■□□□ 1.39
PDE1AP54750 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PDE1AP54750 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.74■■□□□ 1.39
PDE1AP54750 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PDE1AP54750 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.74■■□□□ 1.39
PDE1AP54750 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.74■■□□□ 1.39
PDE1AP54750 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.74■■□□□ 1.39
PDE1AP54750 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE1AP54750 AC087289.5-201ENST00000586076 3175 ntBASIC23.73■■□□□ 1.39
PDE1AP54750 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE1AP54750 LINC01465-201ENST00000408887 1940 ntBASIC23.73■■□□□ 1.39
PDE1AP54750 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.73■■□□□ 1.39
PDE1AP54750 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
PDE1AP54750 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE1AP54750 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.73■■□□□ 1.39
PDE1AP54750 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.73■■□□□ 1.39
PDE1AP54750 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDE1AP54750 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.73■■□□□ 1.39
PDE1AP54750 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.73■■□□□ 1.39
PDE1AP54750 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.73■■□□□ 1.39
PDE1AP54750 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE1AP54750 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE1AP54750 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 AC098818.2-201ENST00000564925 2320 ntBASIC23.72■■□□□ 1.39
PDE1AP54750 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
PDE1AP54750 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.72■■□□□ 1.39
PDE1AP54750 TSPY20P-201ENST00000450910 630 ntBASIC23.72■■□□□ 1.39
PDE1AP54750 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PDE1AP54750 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 AC018445.3-201ENST00000624177 1945 ntBASIC23.72■■□□□ 1.39
PDE1AP54750 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE1AP54750 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE1AP54750 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PDE1AP54750 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.71■■□□□ 1.39
PDE1AP54750 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.71■■□□□ 1.39
PDE1AP54750 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.71■■□□□ 1.39
PDE1AP54750 AC004264.1-201ENST00000608354 794 ntBASIC23.71■■□□□ 1.39
PDE1AP54750 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 AP000974.1-201ENST00000623909 2387 ntBASIC23.71■■□□□ 1.39
PDE1AP54750 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PDE1AP54750 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.71■■□□□ 1.39
PDE1AP54750 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDE1AP54750 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
PDE1AP54750 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDE1AP54750 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDE1AP54750 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PDE1AP54750 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDE1AP54750 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDE1AP54750 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
PDE1AP54750 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.7■■□□□ 1.38
PDE1AP54750 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PDE1AP54750 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms