Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.8■□□□□ 0.76
ATXN3P54252 AP000525.1-201ENST00000608286 694 ntBASIC19.8■□□□□ 0.76
ATXN3P54252 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.8■□□□□ 0.76
ATXN3P54252 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATXN3P54252 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATXN3P54252 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.8■□□□□ 0.76
ATXN3P54252 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.8■□□□□ 0.76
ATXN3P54252 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATXN3P54252 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 AC007225.1-201ENST00000566331 1836 ntBASIC19.79■□□□□ 0.76
ATXN3P54252 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.79■□□□□ 0.76
ATXN3P54252 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 AL137013.1-201ENST00000432946 1228 ntBASIC19.79■□□□□ 0.76
ATXN3P54252 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.79■□□□□ 0.76
ATXN3P54252 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.79■□□□□ 0.76
ATXN3P54252 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.79■□□□□ 0.76
ATXN3P54252 NAPSB-206ENST00000562112 1266 ntBASIC19.79■□□□□ 0.76
ATXN3P54252 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATXN3P54252 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATXN3P54252 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.78■□□□□ 0.76
ATXN3P54252 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
ATXN3P54252 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
ATXN3P54252 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
ATXN3P54252 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.78■□□□□ 0.76
ATXN3P54252 AC113347.1-201ENST00000413321 391 ntBASIC19.78■□□□□ 0.76
ATXN3P54252 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.78■□□□□ 0.76
ATXN3P54252 AC023632.3-201ENST00000521633 145 ntBASIC19.78■□□□□ 0.76
ATXN3P54252 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.78■□□□□ 0.76
ATXN3P54252 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.78■□□□□ 0.76
ATXN3P54252 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.78■□□□□ 0.76
ATXN3P54252 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
ATXN3P54252 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATXN3P54252 KRT18P22-201ENST00000402024 1347 ntBASIC19.77■□□□□ 0.76
ATXN3P54252 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.77■□□□□ 0.76
ATXN3P54252 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATXN3P54252 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATXN3P54252 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.77■□□□□ 0.76
ATXN3P54252 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATXN3P54252 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.77■□□□□ 0.76
ATXN3P54252 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.77■□□□□ 0.76
ATXN3P54252 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.77■□□□□ 0.76
ATXN3P54252 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATXN3P54252 KRT18P57-201ENST00000443599 1254 ntBASIC19.77■□□□□ 0.76
ATXN3P54252 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.77■□□□□ 0.76
ATXN3P54252 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.77■□□□□ 0.76
ATXN3P54252 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.77■□□□□ 0.76
ATXN3P54252 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATXN3P54252 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATXN3P54252 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATXN3P54252 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ATXN3P54252 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.77■□□□□ 0.76
ATXN3P54252 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
ATXN3P54252 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATXN3P54252 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.76■□□□□ 0.75
ATXN3P54252 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.76■□□□□ 0.75
ATXN3P54252 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ATXN3P54252 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.76■□□□□ 0.75
ATXN3P54252 REXO1L10P-201ENST00000615707 1290 ntBASIC19.76■□□□□ 0.75
ATXN3P54252 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATXN3P54252 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms