Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 RDH11-207ENST00000554731 888 ntTSL 311.22□□□□□ -0.618e-7■■□□□ 13.9
NCBP2P52298 RDH11-210ENST00000557331 553 ntTSL 49.1□□□□□ -0.958e-7■■□□□ 13.9
NCBP2P52298 RDH11-209ENST00000557273 562 ntTSL 39.04□□□□□ -0.968e-7■■□□□ 13.9
NCBP2P52298 RDH11-202ENST00000428130 1064 ntTSL 2 BASIC9.04□□□□□ -0.968e-7■■□□□ 13.9
NCBP2P52298 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.118e-7■■□□□ 13.9
NCBP2P52298 RDH11-205ENST00000553816 1163 ntTSL 27.54□□□□□ -1.28e-7■■□□□ 13.9
NCBP2P52298 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.7□□□□□ -1.348e-7■■□□□ 13.9
NCBP2P52298 RDH11-208ENST00000556692 801 ntTSL 22.87□□□□□ -1.958e-7■■□□□ 13.9
NCBP2P52298 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.92e-11■■□□□ 13.9
NCBP2P52298 C16orf58-205ENST00000565128 584 ntTSL 421.5■■□□□ 1.038e-11■■□□□ 13.9
NCBP2P52298 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.34■□□□□ 0.858e-11■■□□□ 13.9
NCBP2P52298 C16orf58-207ENST00000567578 636 ntTSL 420.32■□□□□ 0.848e-11■■□□□ 13.9
NCBP2P52298 C16orf58-203ENST00000541442 1056 ntTSL 220.32■□□□□ 0.848e-11■■□□□ 13.9
NCBP2P52298 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.378e-11■■□□□ 13.9
NCBP2P52298 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.018e-11■■□□□ 13.9
NCBP2P52298 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 08e-11■■□□□ 13.9
NCBP2P52298 C16orf58-204ENST00000564807 555 ntTSL 411.97□□□□□ -0.498e-11■■□□□ 13.9
NCBP2P52298 STK4-206ENST00000488618 932 ntTSL 1 (best)17.83■□□□□ 0.444e-12■■□□□ 13.9
NCBP2P52298 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.13■□□□□ 0.334e-12■■□□□ 13.9
NCBP2P52298 STK4-204ENST00000480745 549 ntTSL 511.41□□□□□ -0.584e-12■■□□□ 13.9
NCBP2P52298 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.234e-12■■□□□ 13.9
NCBP2P52298 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.74□□□□□ -1.334e-12■■□□□ 13.9
NCBP2P52298 STK4-205ENST00000487587 1850 ntTSL 25.63□□□□□ -1.514e-12■■□□□ 13.9
NCBP2P52298 ZNF782-206ENST00000485322 305 ntTSL 323.85■■□□□ 1.414e-9■■□□□ 13.9
NCBP2P52298 ZNF782-204ENST00000478850 932 ntTSL 522.31■■□□□ 1.164e-9■■□□□ 13.9
NCBP2P52298 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.24e-9■■□□□ 13.9
NCBP2P52298 ZNF782-207ENST00000498811 698 ntTSL 39.95□□□□□ -0.824e-9■■□□□ 13.9
NCBP2P52298 ZNF782-201ENST00000289032 2355 ntTSL 24.53□□□□□ -1.684e-9■■□□□ 13.9
NCBP2P52298 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.032e-6■■□□□ 13.9
NCBP2P52298 NAB1-207ENST00000426601 545 ntTSL 413.75□□□□□ -0.212e-6■■□□□ 13.9
NCBP2P52298 NAB1-209ENST00000448811 590 ntTSL 410.38□□□□□ -0.752e-6■■□□□ 13.9
NCBP2P52298 NAB1-204ENST00000416973 568 ntTSL 49.61□□□□□ -0.872e-6■■□□□ 13.9
NCBP2P52298 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.821e-9■■□□□ 13.9
NCBP2P52298 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.28■■□□□ 1.643e-7■■□□□ 13.9
NCBP2P52298 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.62■■□□□ 1.533e-7■■□□□ 13.9
NCBP2P52298 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.533e-7■■□□□ 13.9
NCBP2P52298 SIGMAR1-204ENST00000461426 939 ntTSL 1 (best)24.56■■□□□ 1.523e-7■■□□□ 13.9
NCBP2P52298 AKT2-239ENST00000583859 567 ntTSL 523.45■■□□□ 1.343e-10■■□□□ 13.9
NCBP2P52298 NAP1L4-203ENST00000430811 860 ntTSL 223.16■■□□□ 1.33e-10■■□□□ 13.9
NCBP2P52298 UBP1-205ENST00000456378 581 ntTSL 421.76■■□□□ 1.071e-9■■□□□ 13.9
NCBP2P52298 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.59■■□□□ 1.053e-7■■□□□ 13.9
NCBP2P52298 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.053e-7■■□□□ 13.9
NCBP2P52298 SMARCB1-205ENST00000417137 889 ntTSL 321.43■■□□□ 1.023e-7■■□□□ 13.9
NCBP2P52298 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.993e-7■■□□□ 13.9
NCBP2P52298 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.963e-7■■□□□ 13.9
NCBP2P52298 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.8■□□□□ 0.923e-7■■□□□ 13.9
NCBP2P52298 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.833e-7■■□□□ 13.9
NCBP2P52298 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.17■□□□□ 0.823e-7■■□□□ 13.9
NCBP2P52298 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.06■□□□□ 0.83e-7■■□□□ 13.9
NCBP2P52298 CEP250-212ENST00000476146 550 ntTSL 419.92■□□□□ 0.783e-7■■□□□ 13.9
NCBP2P52298 HAUS5-207ENST00000588570 553 ntTSL 419.79■□□□□ 0.763e-7■■□□□ 13.9
NCBP2P52298 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.35■□□□□ 0.693e-7■■□□□ 13.9
NCBP2P52298 AKT2-214ENST00000456441 582 ntTSL 319.27■□□□□ 0.683e-10■■□□□ 13.9
NCBP2P52298 TRPT1-209ENST00000540472 355 ntTSL 518.91■□□□□ 0.623e-7■■□□□ 13.9
NCBP2P52298 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.623e-7■■□□□ 13.9
NCBP2P52298 SIGMAR1-202ENST00000353468 1582 ntTSL 1 (best)18.9■□□□□ 0.623e-7■■□□□ 13.9
NCBP2P52298 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.583e-7■■□□□ 13.9
NCBP2P52298 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.583e-7■■□□□ 13.9
NCBP2P52298 D2HGDH-205ENST00000432449 566 ntTSL 518.21■□□□□ 0.513e-7■■□□□ 13.9
NCBP2P52298 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.513e-7■■□□□ 13.9
NCBP2P52298 D2HGDH-211ENST00000467427 555 ntTSL 318.21■□□□□ 0.513e-7■■□□□ 13.9
NCBP2P52298 TRPT1-207ENST00000539436 1726 ntTSL 218.02■□□□□ 0.483e-7■■□□□ 13.9
NCBP2P52298 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.461e-9■■□□□ 13.9
NCBP2P52298 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.74■□□□□ 0.433e-7■■□□□ 13.9
NCBP2P52298 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.64■□□□□ 0.413e-7■■□□□ 13.9
NCBP2P52298 TRPT1-214ENST00000545812 681 ntTSL 317.59■□□□□ 0.413e-7■■□□□ 13.9
NCBP2P52298 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.43e-7■■□□□ 13.9
NCBP2P52298 GOLGA8B-208ENST00000567956 533 ntTSL 217.57■□□□□ 0.43e-6■■□□□ 13.9
NCBP2P52298 GOLGA8B-205ENST00000564575 574 ntTSL 417.57■□□□□ 0.43e-6■■□□□ 13.9
NCBP2P52298 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.31■□□□□ 0.364e-9■■□□□ 13.9
NCBP2P52298 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.3■□□□□ 0.363e-7■■□□□ 13.9
NCBP2P52298 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.363e-7■■□□□ 13.9
NCBP2P52298 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.353e-7■■□□□ 13.9
NCBP2P52298 CABIN1-208ENST00000467937 593 ntTSL 317.2■□□□□ 0.343e-7■■□□□ 13.9
NCBP2P52298 TRPT1-208ENST00000539595 1809 ntTSL 517.03■□□□□ 0.323e-7■■□□□ 13.9
NCBP2P52298 ING5-206ENST00000482774 2376 ntTSL 317.01■□□□□ 0.313e-7■■□□□ 13.9
NCBP2P52298 D2HGDH-213ENST00000470343 1026 ntTSL 1 (best)16.7■□□□□ 0.263e-7■■□□□ 13.9
NCBP2P52298 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.243e-7■■□□□ 13.9
NCBP2P52298 TRPT1-206ENST00000537907 602 ntTSL 316.25■□□□□ 0.193e-7■■□□□ 13.9
NCBP2P52298 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.18■□□□□ 0.183e-7■■□□□ 13.9
NCBP2P52298 HAUS5-206ENST00000587439 2758 ntTSL 215.95■□□□□ 0.143e-7■■□□□ 13.9
NCBP2P52298 TRPT1-212ENST00000542040 914 ntTSL 215.95■□□□□ 0.143e-7■■□□□ 13.9
NCBP2P52298 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.063e-7■■□□□ 13.9
NCBP2P52298 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.4■□□□□ 0.063e-7■■□□□ 13.9
NCBP2P52298 AC068205.2-202ENST00000636894 2134 nt15.15■□□□□ 0.023e-7■■□□□ 13.9
NCBP2P52298 TRPT1-205ENST00000536234 1748 ntTSL 315.05■□□□□ -03e-7■■□□□ 13.9
NCBP2P52298 HAUS5-205ENST00000585968 2762 ntTSL 1 (best)15.02□□□□□ -0.013e-7■■□□□ 13.9
NCBP2P52298 OAZ1-205ENST00000589361 679 ntTSL 1 (best)14.87□□□□□ -0.032e-13■■□□□ 13.9
NCBP2P52298 HAUS5-209ENST00000592291 526 ntTSL 314.48□□□□□ -0.093e-7■■□□□ 13.9
NCBP2P52298 CEP250-208ENST00000446710 868 ntTSL 1 (best)14.39□□□□□ -0.113e-7■■□□□ 13.9
NCBP2P52298 SNRNP48-203ENST00000634363 781 ntTSL 214.24□□□□□ -0.132e-13■■□□□ 13.9
NCBP2P52298 ING5-210ENST00000492488 822 ntTSL 214.14□□□□□ -0.153e-7■■□□□ 13.9
NCBP2P52298 ING5-209ENST00000489509 920 ntTSL 213.78□□□□□ -0.23e-7■■□□□ 13.9
NCBP2P52298 DMTF1-237ENST00000584457 569 ntTSL 413.63□□□□□ -0.233e-7■■□□□ 13.9
NCBP2P52298 GOLGA8B-207ENST00000566258 540 ntTSL 413.39□□□□□ -0.273e-6■■□□□ 13.9
NCBP2P52298 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.293e-7■■□□□ 13.9
NCBP2P52298 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.88□□□□□ -0.353e-7■■□□□ 13.9
NCBP2P52298 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.383e-7■■□□□ 13.9
NCBP2P52298 STK11IP-211ENST00000475843 546 ntTSL 312.65□□□□□ -0.383e-7■■□□□ 13.9
NCBP2P52298 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.393e-7■■□□□ 13.9
Retrieved 100 of 18,329 protein–RNA pairs in 162.8 ms