Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 AC007322.3-201ENST00000426526 701 ntBASIC16.89■□□□□ 0.29
GDNFP39905 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.89■□□□□ 0.29
GDNFP39905 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.89■□□□□ 0.29
GDNFP39905 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.89■□□□□ 0.29
GDNFP39905 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.89■□□□□ 0.29
GDNFP39905 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 BID-214ENST00000617586 542 ntTSL 5 BASIC16.89■□□□□ 0.29
GDNFP39905 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
GDNFP39905 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GDNFP39905 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GDNFP39905 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GDNFP39905 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GDNFP39905 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GDNFP39905 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDNFP39905 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 AL133373.2-201ENST00000623187 2828 ntBASIC16.88■□□□□ 0.29
GDNFP39905 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.88■□□□□ 0.29
GDNFP39905 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 AC004911.1-201ENST00000416316 871 ntBASIC16.88■□□□□ 0.29
GDNFP39905 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.88■□□□□ 0.29
GDNFP39905 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.88■□□□□ 0.29
GDNFP39905 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.88■□□□□ 0.29
GDNFP39905 AC016405.3-201ENST00000607710 860 ntBASIC16.88■□□□□ 0.29
GDNFP39905 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GDNFP39905 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
GDNFP39905 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
GDNFP39905 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
GDNFP39905 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.88■□□□□ 0.29
GDNFP39905 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.88■□□□□ 0.29
GDNFP39905 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDNFP39905 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
GDNFP39905 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GDNFP39905 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.87■□□□□ 0.29
GDNFP39905 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.87■□□□□ 0.29
GDNFP39905 AC013268.1-206ENST00000638368 961 ntBASIC16.87■□□□□ 0.29
GDNFP39905 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.87■□□□□ 0.29
GDNFP39905 AC112229.1-201ENST00000639295 961 ntBASIC16.87■□□□□ 0.29
GDNFP39905 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GDNFP39905 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.87■□□□□ 0.29
GDNFP39905 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.87■□□□□ 0.29
GDNFP39905 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GDNFP39905 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDNFP39905 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
GDNFP39905 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.86■□□□□ 0.29
GDNFP39905 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
GDNFP39905 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms