Protein–RNA interactions for Protein: P35609

ACTN2, Alpha-actinin-2, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2P35609 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.65■□□□□ 0.9
ACTN2P35609 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN2P35609 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.65■□□□□ 0.9
ACTN2P35609 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.65■□□□□ 0.9
ACTN2P35609 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ACTN2P35609 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTN2P35609 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTN2P35609 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.65■□□□□ 0.9
ACTN2P35609 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
ACTN2P35609 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
ACTN2P35609 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTN2P35609 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN2P35609 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
ACTN2P35609 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.65■□□□□ 0.9
ACTN2P35609 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTN2P35609 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ACTN2P35609 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN2P35609 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ACTN2P35609 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ACTN2P35609 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.64■□□□□ 0.89
ACTN2P35609 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.64■□□□□ 0.89
ACTN2P35609 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.64■□□□□ 0.89
ACTN2P35609 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.64■□□□□ 0.89
ACTN2P35609 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.64■□□□□ 0.89
ACTN2P35609 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.64■□□□□ 0.89
ACTN2P35609 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ACTN2P35609 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
ACTN2P35609 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ACTN2P35609 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
ACTN2P35609 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ACTN2P35609 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.64■□□□□ 0.89
ACTN2P35609 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN2P35609 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.64■□□□□ 0.89
ACTN2P35609 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.63■□□□□ 0.89
ACTN2P35609 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTN2P35609 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 AC018470.1-201ENST00000624790 3129 ntBASIC20.63■□□□□ 0.89
ACTN2P35609 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ACTN2P35609 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ACTN2P35609 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTN2P35609 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ACTN2P35609 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ACTN2P35609 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ACTN2P35609 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN2P35609 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN2P35609 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ACTN2P35609 AC073210.2-201ENST00000430369 194 ntBASIC20.62■□□□□ 0.89
ACTN2P35609 AF201337.1-201ENST00000520239 748 ntBASIC20.62■□□□□ 0.89
ACTN2P35609 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 BX119927.1-201ENST00000636596 1552 ntBASIC20.62■□□□□ 0.89
ACTN2P35609 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ACTN2P35609 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN2P35609 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ACTN2P35609 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ACTN2P35609 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN2P35609 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN2P35609 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms