Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.31■□□□□ 0.68
GABRB3P28472 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.31■□□□□ 0.68
GABRB3P28472 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.31■□□□□ 0.68
GABRB3P28472 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.31■□□□□ 0.68
GABRB3P28472 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRB3P28472 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
GABRB3P28472 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GABRB3P28472 KRT8P8-201ENST00000434750 1448 ntBASIC19.31■□□□□ 0.68
GABRB3P28472 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GABRB3P28472 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRB3P28472 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
GABRB3P28472 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.31■□□□□ 0.68
GABRB3P28472 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRB3P28472 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRB3P28472 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
GABRB3P28472 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.31■□□□□ 0.68
GABRB3P28472 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.3■□□□□ 0.68
GABRB3P28472 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.3■□□□□ 0.68
GABRB3P28472 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
GABRB3P28472 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
GABRB3P28472 HLA-L-209ENST00000420110 1011 ntBASIC19.3■□□□□ 0.68
GABRB3P28472 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 KRT18P16-201ENST00000510337 1294 ntBASIC19.3■□□□□ 0.68
GABRB3P28472 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.3■□□□□ 0.68
GABRB3P28472 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GABRB3P28472 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
GABRB3P28472 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
GABRB3P28472 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.3■□□□□ 0.68
GABRB3P28472 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
GABRB3P28472 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRB3P28472 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
GABRB3P28472 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.29■□□□□ 0.68
GABRB3P28472 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.29■□□□□ 0.68
GABRB3P28472 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GABRB3P28472 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.29■□□□□ 0.68
GABRB3P28472 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.29■□□□□ 0.68
GABRB3P28472 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.29■□□□□ 0.68
GABRB3P28472 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
GABRB3P28472 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GABRB3P28472 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GABRB3P28472 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRB3P28472 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRB3P28472 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRB3P28472 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRB3P28472 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 AL355802.2-201ENST00000402069 882 ntBASIC19.28■□□□□ 0.68
GABRB3P28472 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRB3P28472 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.28■□□□□ 0.68
GABRB3P28472 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.28■□□□□ 0.68
GABRB3P28472 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRB3P28472 AC008403.3-201ENST00000598924 454 ntBASIC19.28■□□□□ 0.68
GABRB3P28472 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRB3P28472 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GABRB3P28472 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
GABRB3P28472 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GABRB3P28472 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRB3P28472 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRB3P28472 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRB3P28472 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRB3P28472 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRB3P28472 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRB3P28472 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRB3P28472 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.27■□□□□ 0.68
GABRB3P28472 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms