Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.86■□□□□ 0.29
ACKR3P25106 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.86■□□□□ 0.29
ACKR3P25106 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.86■□□□□ 0.29
ACKR3P25106 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.86■□□□□ 0.29
ACKR3P25106 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.86■□□□□ 0.29
ACKR3P25106 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.86■□□□□ 0.29
ACKR3P25106 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.86■□□□□ 0.29
ACKR3P25106 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ACKR3P25106 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ACKR3P25106 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ACKR3P25106 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ACKR3P25106 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ACKR3P25106 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ACKR3P25106 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ACKR3P25106 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.85■□□□□ 0.29
ACKR3P25106 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.85■□□□□ 0.29
ACKR3P25106 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.85■□□□□ 0.29
ACKR3P25106 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.85■□□□□ 0.29
ACKR3P25106 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ACKR3P25106 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.85■□□□□ 0.29
ACKR3P25106 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 AC098818.2-201ENST00000564925 2320 ntBASIC16.85■□□□□ 0.29
ACKR3P25106 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ACKR3P25106 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ACKR3P25106 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.84■□□□□ 0.29
ACKR3P25106 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.84■□□□□ 0.29
ACKR3P25106 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ACKR3P25106 HLA-L-209ENST00000420110 1011 ntBASIC16.84■□□□□ 0.29
ACKR3P25106 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.84■□□□□ 0.29
ACKR3P25106 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.84■□□□□ 0.29
ACKR3P25106 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.84■□□□□ 0.29
ACKR3P25106 SOX15-203ENST00000570788 1093 ntBASIC16.84■□□□□ 0.29
ACKR3P25106 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.84■□□□□ 0.29
ACKR3P25106 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 AC018445.3-201ENST00000624177 1945 ntBASIC16.84■□□□□ 0.29
ACKR3P25106 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.84■□□□□ 0.29
ACKR3P25106 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.84■□□□□ 0.29
ACKR3P25106 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ACKR3P25106 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACKR3P25106 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.83■□□□□ 0.29
ACKR3P25106 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms