Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
XPAP23025 BCL2-203ENST00000589955 5011 ntBASIC19.61■□□□□ 0.73
XPAP23025 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.61■□□□□ 0.73
XPAP23025 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.61■□□□□ 0.73
XPAP23025 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
XPAP23025 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.61■□□□□ 0.73
XPAP23025 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.61■□□□□ 0.73
XPAP23025 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.61■□□□□ 0.73
XPAP23025 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.61■□□□□ 0.73
XPAP23025 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.61■□□□□ 0.73
XPAP23025 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
XPAP23025 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XPAP23025 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.6■□□□□ 0.73
XPAP23025 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.6■□□□□ 0.73
XPAP23025 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.6■□□□□ 0.73
XPAP23025 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.6■□□□□ 0.73
XPAP23025 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.6■□□□□ 0.73
XPAP23025 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XPAP23025 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
XPAP23025 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.6■□□□□ 0.73
XPAP23025 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
XPAP23025 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.59■□□□□ 0.73
XPAP23025 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
XPAP23025 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
XPAP23025 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
XPAP23025 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.59■□□□□ 0.73
XPAP23025 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.59■□□□□ 0.73
XPAP23025 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.59■□□□□ 0.73
XPAP23025 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.59■□□□□ 0.73
XPAP23025 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.59■□□□□ 0.73
XPAP23025 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
XPAP23025 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
XPAP23025 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.59■□□□□ 0.73
XPAP23025 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
XPAP23025 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
XPAP23025 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
XPAP23025 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
XPAP23025 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
XPAP23025 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
XPAP23025 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.58■□□□□ 0.72
XPAP23025 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
XPAP23025 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 AP003071.4-201ENST00000562276 1284 ntBASIC19.58■□□□□ 0.72
XPAP23025 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
XPAP23025 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.58■□□□□ 0.72
XPAP23025 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.58■□□□□ 0.72
XPAP23025 AC131212.4-201ENST00000623606 975 ntBASIC19.58■□□□□ 0.72
XPAP23025 AL031985.4-201ENST00000642138 673 ntBASIC19.58■□□□□ 0.72
XPAP23025 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
XPAP23025 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
XPAP23025 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms