Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 KRASP1-201ENST00000407852 552 ntBASIC19.61■□□□□ 0.73
HLA-DPA1P20036 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 AC133681.1-201ENST00000465482 601 ntBASIC19.61■□□□□ 0.73
HLA-DPA1P20036 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DPA1P20036 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 AC124016.1-201ENST00000609552 612 ntBASIC19.6■□□□□ 0.73
HLA-DPA1P20036 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 AC116562.4-201ENST00000641316 2276 ntBASIC19.6■□□□□ 0.73
HLA-DPA1P20036 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DPA1P20036 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 ZNF815P-204ENST00000434898 1737 ntBASIC19.59■□□□□ 0.73
HLA-DPA1P20036 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 Z82202.1-201ENST00000623446 1880 ntBASIC19.59■□□□□ 0.73
HLA-DPA1P20036 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 ITM2C-210ENST00000620962 501 ntBASIC19.59■□□□□ 0.73
HLA-DPA1P20036 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.59■□□□□ 0.73
HLA-DPA1P20036 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DPA1P20036 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DPA1P20036 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DPA1P20036 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms