Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
KRT4P19013 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.48■□□□□ 0.71
KRT4P19013 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 CYP2T3P-201ENST00000601990 817 ntBASIC19.48■□□□□ 0.71
KRT4P19013 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
KRT4P19013 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.48■□□□□ 0.71
KRT4P19013 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
KRT4P19013 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT4P19013 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT4P19013 AC018553.1-201ENST00000616682 1458 ntBASIC19.48■□□□□ 0.71
KRT4P19013 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KRT4P19013 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT4P19013 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KRT4P19013 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KRT4P19013 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
KRT4P19013 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
KRT4P19013 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT4P19013 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.47■□□□□ 0.71
KRT4P19013 NTF6G-201ENST00000591094 616 ntBASIC19.47■□□□□ 0.71
KRT4P19013 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 AC068338.2-201ENST00000563278 1430 ntBASIC19.47■□□□□ 0.71
KRT4P19013 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT4P19013 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT4P19013 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KRT4P19013 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KRT4P19013 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT4P19013 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 AL355472.2-201ENST00000422958 438 ntBASIC19.46■□□□□ 0.71
KRT4P19013 KRT18P11-201ENST00000435214 1283 ntBASIC19.46■□□□□ 0.71
KRT4P19013 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT4P19013 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KRT4P19013 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT4P19013 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT4P19013 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT4P19013 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT4P19013 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT4P19013 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
KRT4P19013 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT4P19013 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT4P19013 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.45■□□□□ 0.7
KRT4P19013 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT4P19013 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
KRT4P19013 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KRT4P19013 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KRT4P19013 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KRT4P19013 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT4P19013 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT4P19013 C2orf69P4-201ENST00000565394 541 ntBASIC19.45■□□□□ 0.7
KRT4P19013 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT4P19013 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT4P19013 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT4P19013 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms