Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFEP18615 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NELFEP18615 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.17■□□□□ 0.66
NELFEP18615 FP700111.2-201ENST00000619190 1892 ntBASIC19.17■□□□□ 0.66
NELFEP18615 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NELFEP18615 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NELFEP18615 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.17■□□□□ 0.66
NELFEP18615 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.17■□□□□ 0.66
NELFEP18615 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 AC012618.2-201ENST00000428058 849 ntBASIC19.16■□□□□ 0.66
NELFEP18615 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.16■□□□□ 0.66
NELFEP18615 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.16■□□□□ 0.66
NELFEP18615 MIR4497-201ENST00000583208 89 ntBASIC19.16■□□□□ 0.66
NELFEP18615 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NELFEP18615 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFEP18615 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NELFEP18615 AC124283.5-201ENST00000624661 1809 ntBASIC19.16■□□□□ 0.66
NELFEP18615 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFEP18615 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
NELFEP18615 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
NELFEP18615 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.15■□□□□ 0.66
NELFEP18615 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.15■□□□□ 0.66
NELFEP18615 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.15■□□□□ 0.66
NELFEP18615 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.15■□□□□ 0.66
NELFEP18615 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 KRT8P20-201ENST00000423953 1409 ntBASIC19.15■□□□□ 0.66
NELFEP18615 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NELFEP18615 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
NELFEP18615 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NELFEP18615 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFEP18615 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NELFEP18615 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NELFEP18615 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
NELFEP18615 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NELFEP18615 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
NELFEP18615 RPS2P55-201ENST00000397318 883 ntBASIC19.14■□□□□ 0.65
NELFEP18615 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NELFEP18615 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.14■□□□□ 0.65
NELFEP18615 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.14■□□□□ 0.65
NELFEP18615 AC107956.1-201ENST00000494359 873 ntBASIC19.14■□□□□ 0.65
NELFEP18615 AC233702.5-201ENST00000584107 538 ntBASIC19.14■□□□□ 0.65
NELFEP18615 AL031963.3-201ENST00000606441 850 ntBASIC19.14■□□□□ 0.65
NELFEP18615 AL135905.2-201ENST00000584934 1404 ntBASIC19.14■□□□□ 0.65
NELFEP18615 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 NEFHP1-201ENST00000412845 2629 ntBASIC19.14■□□□□ 0.65
NELFEP18615 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NELFEP18615 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.13■□□□□ 0.65
NELFEP18615 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NELFEP18615 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NELFEP18615 AC125437.2-201ENST00000625180 2167 ntBASIC19.13■□□□□ 0.65
NELFEP18615 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.13■□□□□ 0.65
NELFEP18615 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.13■□□□□ 0.65
NELFEP18615 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
NELFEP18615 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
NELFEP18615 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NELFEP18615 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NELFEP18615 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.13■□□□□ 0.65
NELFEP18615 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NELFEP18615 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.13■□□□□ 0.65
NELFEP18615 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms