Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.51■□□□□ 0.71
VCLP18206 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.51■□□□□ 0.71
VCLP18206 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.51■□□□□ 0.71
VCLP18206 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.51■□□□□ 0.71
VCLP18206 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VCLP18206 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCLP18206 TMEM179-206ENST00000616017 1645 ntBASIC19.51■□□□□ 0.71
VCLP18206 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
VCLP18206 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
VCLP18206 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
VCLP18206 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VCLP18206 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.5■□□□□ 0.71
VCLP18206 GCSHP5-201ENST00000443090 522 ntBASIC19.5■□□□□ 0.71
VCLP18206 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.5■□□□□ 0.71
VCLP18206 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.5■□□□□ 0.71
VCLP18206 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.5■□□□□ 0.71
VCLP18206 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.5■□□□□ 0.71
VCLP18206 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.5■□□□□ 0.71
VCLP18206 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
VCLP18206 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
VCLP18206 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCLP18206 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VCLP18206 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.49■□□□□ 0.71
VCLP18206 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.49■□□□□ 0.71
VCLP18206 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VCLP18206 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VCLP18206 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.49■□□□□ 0.71
VCLP18206 AC098590.1-201ENST00000468126 897 ntBASIC19.49■□□□□ 0.71
VCLP18206 RPPH1-201ENST00000516869 333 ntBASIC19.49■□□□□ 0.71
VCLP18206 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.49■□□□□ 0.71
VCLP18206 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.49■□□□□ 0.71
VCLP18206 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.49■□□□□ 0.71
VCLP18206 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.49■□□□□ 0.71
VCLP18206 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCLP18206 AC124283.5-201ENST00000624661 1809 ntBASIC19.48■□□□□ 0.71
VCLP18206 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.48■□□□□ 0.71
VCLP18206 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.48■□□□□ 0.71
VCLP18206 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.48■□□□□ 0.71
VCLP18206 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VCLP18206 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.48■□□□□ 0.71
VCLP18206 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.48■□□□□ 0.71
VCLP18206 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.48■□□□□ 0.71
VCLP18206 AL023875.1-201ENST00000640777 796 ntBASIC19.48■□□□□ 0.71
VCLP18206 AP006294.2-201ENST00000641667 209 ntBASIC19.48■□□□□ 0.71
VCLP18206 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VCLP18206 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.48■□□□□ 0.71
VCLP18206 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VCLP18206 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.48■□□□□ 0.71
VCLP18206 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCLP18206 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VCLP18206 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
VCLP18206 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.47■□□□□ 0.71
VCLP18206 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VCLP18206 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCLP18206 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms