Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SP9P0CG40 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SP9P0CG40 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.2■□□□□ 0.66
SP9P0CG40 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SP9P0CG40 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.2■□□□□ 0.66
SP9P0CG40 LINC01711-201ENST00000598340 967 ntBASIC19.2■□□□□ 0.66
SP9P0CG40 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SP9P0CG40 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SP9P0CG40 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.2■□□□□ 0.66
SP9P0CG40 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SP9P0CG40 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SP9P0CG40 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SP9P0CG40 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SP9P0CG40 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SP9P0CG40 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SP9P0CG40 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SP9P0CG40 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SP9P0CG40 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 AP002469.2-201ENST00000531724 424 ntBASIC19.19■□□□□ 0.66
SP9P0CG40 MIR4674-201ENST00000582457 87 ntBASIC19.19■□□□□ 0.66
SP9P0CG40 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.19■□□□□ 0.66
SP9P0CG40 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.19■□□□□ 0.66
SP9P0CG40 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.19■□□□□ 0.66
SP9P0CG40 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.19■□□□□ 0.66
SP9P0CG40 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SP9P0CG40 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
SP9P0CG40 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 FP700111.2-201ENST00000619190 1892 ntBASIC19.18■□□□□ 0.66
SP9P0CG40 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.18■□□□□ 0.66
SP9P0CG40 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.18■□□□□ 0.66
SP9P0CG40 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.18■□□□□ 0.66
SP9P0CG40 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SP9P0CG40 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SP9P0CG40 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.18■□□□□ 0.66
SP9P0CG40 CHCHD2P8-201ENST00000429873 447 ntBASIC19.18■□□□□ 0.66
SP9P0CG40 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.18■□□□□ 0.66
SP9P0CG40 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 AL662844.1-201ENST00000546340 181 ntBASIC19.18■□□□□ 0.66
SP9P0CG40 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.18■□□□□ 0.66
SP9P0CG40 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.18■□□□□ 0.66
SP9P0CG40 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.18■□□□□ 0.66
SP9P0CG40 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.18■□□□□ 0.66
SP9P0CG40 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 AL671883.3-201ENST00000603274 991 ntBASIC19.18■□□□□ 0.66
SP9P0CG40 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.18■□□□□ 0.66
SP9P0CG40 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.18■□□□□ 0.66
SP9P0CG40 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SP9P0CG40 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SP9P0CG40 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.17■□□□□ 0.66
SP9P0CG40 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SP9P0CG40 PLK5-205ENST00000642079 1969 ntBASIC19.17■□□□□ 0.66
SP9P0CG40 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SP9P0CG40 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.17■□□□□ 0.66
SP9P0CG40 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.17■□□□□ 0.66
SP9P0CG40 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.17■□□□□ 0.66
SP9P0CG40 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.17■□□□□ 0.66
SP9P0CG40 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.17■□□□□ 0.66
SP9P0CG40 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.17■□□□□ 0.66
SP9P0CG40 AC117500.6-201ENST00000624871 588 ntBASIC19.17■□□□□ 0.66
SP9P0CG40 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.17■□□□□ 0.66
SP9P0CG40 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.17■□□□□ 0.66
SP9P0CG40 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SP9P0CG40 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SP9P0CG40 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SP9P0CG40 KRT8P11-201ENST00000409686 1436 ntBASIC19.17■□□□□ 0.66
SP9P0CG40 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.16■□□□□ 0.66
SP9P0CG40 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SP9P0CG40 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms