Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC172P0C7W6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 TSPY6P-201ENST00000448518 926 ntBASIC20.97■□□□□ 0.95
CCDC172P0C7W6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC172P0C7W6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 HLA-B-256ENST00000639848 1089 ntBASIC20.96■□□□□ 0.95
CCDC172P0C7W6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC172P0C7W6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.95■□□□□ 0.94
CCDC172P0C7W6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 AC006557.6-201ENST00000623071 864 ntBASIC20.95■□□□□ 0.94
CCDC172P0C7W6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC172P0C7W6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 AC092368.3-202ENST00000574180 1591 ntBASIC20.94■□□□□ 0.94
CCDC172P0C7W6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.94■□□□□ 0.94
CCDC172P0C7W6 RPS2P52-201ENST00000469610 820 ntBASIC20.94■□□□□ 0.94
CCDC172P0C7W6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.94■□□□□ 0.94
CCDC172P0C7W6 AL121906.2-201ENST00000621597 723 ntBASIC20.94■□□□□ 0.94
CCDC172P0C7W6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 AP000974.1-201ENST00000623909 2387 ntBASIC20.94■□□□□ 0.94
CCDC172P0C7W6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC172P0C7W6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC172P0C7W6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms