Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.14■□□□□ 0.81
CD48P09326 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 AC104417.2-201ENST00000562989 1793 ntBASIC20.14■□□□□ 0.81
CD48P09326 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CD48P09326 TEX21P-204ENST00000641479 1693 ntBASIC20.14■□□□□ 0.81
CD48P09326 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CD48P09326 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.14■□□□□ 0.81
CD48P09326 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.14■□□□□ 0.81
CD48P09326 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.14■□□□□ 0.81
CD48P09326 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.14■□□□□ 0.81
CD48P09326 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.14■□□□□ 0.81
CD48P09326 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 AC069544.1-201ENST00000609399 999 ntBASIC20.14■□□□□ 0.81
CD48P09326 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.14■□□□□ 0.81
CD48P09326 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CD48P09326 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD48P09326 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CD48P09326 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CD48P09326 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.13■□□□□ 0.81
CD48P09326 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.13■□□□□ 0.81
CD48P09326 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.13■□□□□ 0.81
CD48P09326 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.13■□□□□ 0.81
CD48P09326 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.13■□□□□ 0.81
CD48P09326 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.13■□□□□ 0.81
CD48P09326 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.13■□□□□ 0.81
CD48P09326 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD48P09326 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.12■□□□□ 0.81
CD48P09326 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.12■□□□□ 0.81
CD48P09326 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 MTDHP1-201ENST00000605323 784 ntBASIC20.12■□□□□ 0.81
CD48P09326 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
CD48P09326 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD48P09326 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CD48P09326 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.11■□□□□ 0.81
CD48P09326 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.11■□□□□ 0.81
CD48P09326 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CD48P09326 ESRRAP1-201ENST00000400596 1257 ntBASIC20.11■□□□□ 0.81
CD48P09326 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.11■□□□□ 0.81
CD48P09326 TUBB8P6-201ENST00000436895 1288 ntBASIC20.11■□□□□ 0.81
CD48P09326 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.11■□□□□ 0.81
CD48P09326 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.11■□□□□ 0.81
CD48P09326 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.11■□□□□ 0.81
CD48P09326 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.11■□□□□ 0.81
CD48P09326 MIR4651-201ENST00000582622 73 ntBASIC20.11■□□□□ 0.81
CD48P09326 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.11■□□□□ 0.81
CD48P09326 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD48P09326 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CD48P09326 LINC01465-201ENST00000408887 1940 ntBASIC20.11■□□□□ 0.81
CD48P09326 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.11■□□□□ 0.81
CD48P09326 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CD48P09326 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CD48P09326 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.11■□□□□ 0.81
CD48P09326 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.11■□□□□ 0.81
CD48P09326 BX323043.1-201ENST00000641006 1765 ntBASIC20.11■□□□□ 0.81
CD48P09326 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CD48P09326 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.1■□□□□ 0.81
CD48P09326 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CD48P09326 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.1■□□□□ 0.81
CD48P09326 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms