Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.77■■□□□ 1.08
TPM3P06753 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.77■■□□□ 1.08
TPM3P06753 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 PCDHB18P-201ENST00000524813 2368 ntBASIC21.77■■□□□ 1.08
TPM3P06753 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.77■■□□□ 1.08
TPM3P06753 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.77■■□□□ 1.08
TPM3P06753 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TPM3P06753 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TPM3P06753 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.77■■□□□ 1.07
TPM3P06753 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
TPM3P06753 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TPM3P06753 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TPM3P06753 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.76■■□□□ 1.07
TPM3P06753 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.76■■□□□ 1.07
TPM3P06753 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 UBE2DNL-204ENST00000602536 740 ntBASIC21.76■■□□□ 1.07
TPM3P06753 MYCNOS-205ENST00000641950 531 ntBASIC21.76■■□□□ 1.07
TPM3P06753 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.76■■□□□ 1.07
TPM3P06753 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.76■■□□□ 1.07
TPM3P06753 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.76■■□□□ 1.07
TPM3P06753 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.76■■□□□ 1.07
TPM3P06753 LTB4R2-202ENST00000528054 3092 ntBASIC21.76■■□□□ 1.07
TPM3P06753 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TPM3P06753 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TPM3P06753 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TPM3P06753 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.75■■□□□ 1.07
TPM3P06753 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TPM3P06753 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 AL162412.1-201ENST00000567129 965 ntBASIC21.75■■□□□ 1.07
TPM3P06753 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.75■■□□□ 1.07
TPM3P06753 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TPM3P06753 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TPM3P06753 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TPM3P06753 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.75■■□□□ 1.07
TPM3P06753 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TPM3P06753 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 NOC2LP2-201ENST00000407594 1944 ntBASIC21.74■■□□□ 1.07
TPM3P06753 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.74■■□□□ 1.07
TPM3P06753 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TPM3P06753 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.74■■□□□ 1.07
TPM3P06753 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TPM3P06753 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.74■■□□□ 1.07
TPM3P06753 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TPM3P06753 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
TPM3P06753 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TPM3P06753 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TPM3P06753 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 AC006333.2-201ENST00000607957 2099 ntBASIC21.73■■□□□ 1.07
TPM3P06753 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TPM3P06753 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.73■■□□□ 1.07
TPM3P06753 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.73■■□□□ 1.07
TPM3P06753 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.73■■□□□ 1.07
TPM3P06753 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.73■■□□□ 1.07
TPM3P06753 HLA-G-202ENST00000376815 851 ntBASIC21.73■■□□□ 1.07
TPM3P06753 HLA-G-203ENST00000376818 1127 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms