Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.32■■□□□ 1
VTNP04004 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.32■■□□□ 1
VTNP04004 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.32■■□□□ 1
VTNP04004 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.32■■□□□ 1
VTNP04004 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
VTNP04004 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.31■■□□□ 1
VTNP04004 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VTNP04004 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.31■■□□□ 1
VTNP04004 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.31■■□□□ 1
VTNP04004 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.31■■□□□ 1
VTNP04004 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.31■■□□□ 1
VTNP04004 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VTNP04004 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.31■■□□□ 1
VTNP04004 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VTNP04004 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.31■■□□□ 1
VTNP04004 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.31■■□□□ 1
VTNP04004 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
VTNP04004 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.31■■□□□ 1
VTNP04004 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.31■■□□□ 1
VTNP04004 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.31■■□□□ 1
VTNP04004 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
VTNP04004 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
VTNP04004 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
VTNP04004 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VTNP04004 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VTNP04004 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.3■■□□□ 1
VTNP04004 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 KRT8P41-201ENST00000533985 1514 ntBASIC21.3■■□□□ 1
VTNP04004 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.3■■□□□ 1
VTNP04004 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VTNP04004 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
VTNP04004 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.3■■□□□ 1
VTNP04004 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VTNP04004 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.3■■□□□ 1
VTNP04004 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.3■■□□□ 1
VTNP04004 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
VTNP04004 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.3■■□□□ 1
VTNP04004 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.3■■□□□ 1
VTNP04004 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VTNP04004 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.3■■□□□ 1
VTNP04004 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.3■■□□□ 1
VTNP04004 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VTNP04004 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
VTNP04004 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
VTNP04004 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.29■■□□□ 1
VTNP04004 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
VTNP04004 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
VTNP04004 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VTNP04004 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.29■■□□□ 1
VTNP04004 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
VTNP04004 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VTNP04004 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.29■■□□□ 1
VTNP04004 AL049597.2-201ENST00000565575 961 ntBASIC21.29■■□□□ 1
VTNP04004 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.29■■□□□ 1
VTNP04004 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.29■■□□□ 1
VTNP04004 AL445228.2-201ENST00000605589 952 ntBASIC21.29■■□□□ 1
VTNP04004 FAM87A-204ENST00000613235 858 ntBASIC21.29■■□□□ 1
VTNP04004 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.29■■□□□ 1
VTNP04004 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.29■■□□□ 1
VTNP04004 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
VTNP04004 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VTNP04004 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.28■■□□□ 1
VTNP04004 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
VTNP04004 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.28■■□□□ 1
VTNP04004 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.28■■□□□ 1
VTNP04004 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.28■■□□□ 1
VTNP04004 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.28■■□□□ 1
VTNP04004 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VTNP04004 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
VTNP04004 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.28■■□□□ 1
VTNP04004 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTNP04004 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms