Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.29■□□□□ 0.52
CLPTM1O96005 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.29■□□□□ 0.52
CLPTM1O96005 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.29■□□□□ 0.52
CLPTM1O96005 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.29■□□□□ 0.52
CLPTM1O96005 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.29■□□□□ 0.52
CLPTM1O96005 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.29■□□□□ 0.52
CLPTM1O96005 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.29■□□□□ 0.52
CLPTM1O96005 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.29■□□□□ 0.52
CLPTM1O96005 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.29■□□□□ 0.52
CLPTM1O96005 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.29■□□□□ 0.52
CLPTM1O96005 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPTM1O96005 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
CLPTM1O96005 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLPTM1O96005 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPTM1O96005 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CLPTM1O96005 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 AP004607.4-201ENST00000530158 1459 ntBASIC18.28■□□□□ 0.52
CLPTM1O96005 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLPTM1O96005 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLPTM1O96005 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLPTM1O96005 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPTM1O96005 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CLPTM1O96005 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPTM1O96005 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLPTM1O96005 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLPTM1O96005 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPTM1O96005 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CLPTM1O96005 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPTM1O96005 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.27■□□□□ 0.52
CLPTM1O96005 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPTM1O96005 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLPTM1O96005 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPTM1O96005 PRORSD1P-202ENST00000563365 2154 ntBASIC18.27■□□□□ 0.52
CLPTM1O96005 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPTM1O96005 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.27■□□□□ 0.52
CLPTM1O96005 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.27■□□□□ 0.52
CLPTM1O96005 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPTM1O96005 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPTM1O96005 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.27■□□□□ 0.52
CLPTM1O96005 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.27■□□□□ 0.52
CLPTM1O96005 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.27■□□□□ 0.52
CLPTM1O96005 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.27■□□□□ 0.51
CLPTM1O96005 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CLPTM1O96005 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLPTM1O96005 WIZP1-201ENST00000531444 2299 ntBASIC18.26■□□□□ 0.51
CLPTM1O96005 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLPTM1O96005 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.26■□□□□ 0.51
CLPTM1O96005 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.26■□□□□ 0.51
CLPTM1O96005 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.26■□□□□ 0.51
CLPTM1O96005 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.26■□□□□ 0.51
CLPTM1O96005 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPTM1O96005 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPTM1O96005 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPTM1O96005 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPTM1O96005 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPTM1O96005 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPTM1O96005 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPTM1O96005 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms