Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GGPS1O95749 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
GGPS1O95749 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
GGPS1O95749 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.83■■□□□ 1.09
GGPS1O95749 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.83■■□□□ 1.09
GGPS1O95749 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GGPS1O95749 ECEL1P2-202ENST00000465689 757 ntBASIC21.83■■□□□ 1.09
GGPS1O95749 AL160286.2-201ENST00000567150 934 ntBASIC21.83■■□□□ 1.09
GGPS1O95749 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.83■■□□□ 1.09
GGPS1O95749 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
GGPS1O95749 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.08
GGPS1O95749 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.83■■□□□ 1.08
GGPS1O95749 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GGPS1O95749 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
GGPS1O95749 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
GGPS1O95749 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
GGPS1O95749 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.83■■□□□ 1.08
GGPS1O95749 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GGPS1O95749 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.82■■□□□ 1.08
GGPS1O95749 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GGPS1O95749 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GGPS1O95749 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GGPS1O95749 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
GGPS1O95749 AC073508.3-201ENST00000619697 1419 ntBASIC21.82■■□□□ 1.08
GGPS1O95749 INGX-201ENST00000359239 846 ntBASIC21.82■■□□□ 1.08
GGPS1O95749 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
GGPS1O95749 MFAP1P1-201ENST00000442257 1255 ntBASIC21.82■■□□□ 1.08
GGPS1O95749 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.82■■□□□ 1.08
GGPS1O95749 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.82■■□□□ 1.08
GGPS1O95749 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.82■■□□□ 1.08
GGPS1O95749 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.82■■□□□ 1.08
GGPS1O95749 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GGPS1O95749 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
GGPS1O95749 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
GGPS1O95749 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.82■■□□□ 1.08
GGPS1O95749 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.81■■□□□ 1.08
GGPS1O95749 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.81■■□□□ 1.08
GGPS1O95749 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.81■■□□□ 1.08
GGPS1O95749 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
GGPS1O95749 AC099778.1-201ENST00000568593 1911 ntBASIC21.81■■□□□ 1.08
GGPS1O95749 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.81■■□□□ 1.08
GGPS1O95749 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.81■■□□□ 1.08
GGPS1O95749 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
GGPS1O95749 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.81■■□□□ 1.08
GGPS1O95749 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.81■■□□□ 1.08
GGPS1O95749 AC010203.1-204ENST00000548782 407 ntBASIC21.81■■□□□ 1.08
GGPS1O95749 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.81■■□□□ 1.08
GGPS1O95749 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.81■■□□□ 1.08
GGPS1O95749 AC096733.2-201ENST00000609937 1394 ntBASIC21.81■■□□□ 1.08
GGPS1O95749 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
GGPS1O95749 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
GGPS1O95749 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GGPS1O95749 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.81■■□□□ 1.08
GGPS1O95749 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.8■■□□□ 1.08
GGPS1O95749 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
GGPS1O95749 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
GGPS1O95749 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.8■■□□□ 1.08
GGPS1O95749 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.8■■□□□ 1.08
GGPS1O95749 AL049597.2-201ENST00000565575 961 ntBASIC21.8■■□□□ 1.08
GGPS1O95749 AL445228.2-201ENST00000605589 952 ntBASIC21.8■■□□□ 1.08
GGPS1O95749 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GGPS1O95749 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
GGPS1O95749 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.79■■□□□ 1.08
GGPS1O95749 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
GGPS1O95749 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GGPS1O95749 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.79■■□□□ 1.08
GGPS1O95749 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GGPS1O95749 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.79■■□□□ 1.08
GGPS1O95749 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GGPS1O95749 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms