Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIX6O95475 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX6O95475 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SIX6O95475 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.24■□□□□ 0.19
SIX6O95475 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.24■□□□□ 0.19
SIX6O95475 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
SIX6O95475 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SIX6O95475 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SIX6O95475 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX6O95475 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.24■□□□□ 0.19
SIX6O95475 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX6O95475 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX6O95475 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
SIX6O95475 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX6O95475 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX6O95475 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX6O95475 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SIX6O95475 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX6O95475 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX6O95475 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SIX6O95475 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.23■□□□□ 0.19
SIX6O95475 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SIX6O95475 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.23■□□□□ 0.19
SIX6O95475 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.23■□□□□ 0.19
SIX6O95475 MIR3621-201ENST00000580529 85 ntBASIC16.23■□□□□ 0.19
SIX6O95475 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SIX6O95475 AC105233.4-201ENST00000642045 216 ntBASIC16.23■□□□□ 0.19
SIX6O95475 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SIX6O95475 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX6O95475 Z98044.1-201ENST00000632503 1764 ntBASIC16.23■□□□□ 0.19
SIX6O95475 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.23■□□□□ 0.19
SIX6O95475 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SIX6O95475 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.23■□□□□ 0.19
SIX6O95475 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIX6O95475 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX6O95475 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX6O95475 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 TEX21P-204ENST00000641479 1693 ntBASIC16.22■□□□□ 0.19
SIX6O95475 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SIX6O95475 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SIX6O95475 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX6O95475 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX6O95475 DUX4L19-201ENST00000557448 1267 ntBASIC16.22■□□□□ 0.19
SIX6O95475 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX6O95475 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX6O95475 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SIX6O95475 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX6O95475 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX6O95475 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX6O95475 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIX6O95475 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX6O95475 TNRC18P3-201ENST00000441896 2691 ntBASIC16.22■□□□□ 0.19
SIX6O95475 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms