Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.56■■□□□ 1.2
PRPF40AO75400 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
PRPF40AO75400 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.56■■□□□ 1.2
PRPF40AO75400 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PRPF40AO75400 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PRPF40AO75400 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.56■■□□□ 1.2
PRPF40AO75400 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PRPF40AO75400 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.56■■□□□ 1.2
PRPF40AO75400 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PRPF40AO75400 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.56■■□□□ 1.2
PRPF40AO75400 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PRPF40AO75400 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PRPF40AO75400 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 TEX21P-204ENST00000641479 1693 ntBASIC22.55■■□□□ 1.2
PRPF40AO75400 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.55■■□□□ 1.2
PRPF40AO75400 MFSD11-216ENST00000590393 1141 ntBASIC22.55■■□□□ 1.2
PRPF40AO75400 AC011767.1-201ENST00000617410 1153 ntBASIC22.55■■□□□ 1.2
PRPF40AO75400 AC010536.3-201ENST00000620306 533 ntBASIC22.55■■□□□ 1.2
PRPF40AO75400 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
PRPF40AO75400 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PRPF40AO75400 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PRPF40AO75400 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 HLA-G-202ENST00000376815 851 ntBASIC22.54■■□□□ 1.2
PRPF40AO75400 HLA-G-203ENST00000376818 1127 ntBASIC22.54■■□□□ 1.2
PRPF40AO75400 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.54■■□□□ 1.2
PRPF40AO75400 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.54■■□□□ 1.2
PRPF40AO75400 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.54■■□□□ 1.2
PRPF40AO75400 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 AC073111.5-205ENST00000641717 521 ntBASIC22.54■■□□□ 1.2
PRPF40AO75400 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PRPF40AO75400 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PRPF40AO75400 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.54■■□□□ 1.2
PRPF40AO75400 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PRPF40AO75400 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.54■■□□□ 1.2
PRPF40AO75400 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.54■■□□□ 1.2
PRPF40AO75400 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.54■■□□□ 1.2
PRPF40AO75400 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.54■■□□□ 1.2
PRPF40AO75400 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRPF40AO75400 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PRPF40AO75400 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.53■■□□□ 1.2
PRPF40AO75400 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PRPF40AO75400 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
PRPF40AO75400 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 CDCA4P2-201ENST00000441182 718 ntBASIC22.53■■□□□ 1.2
PRPF40AO75400 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.53■■□□□ 1.2
PRPF40AO75400 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.53■■□□□ 1.2
PRPF40AO75400 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PRPF40AO75400 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
PRPF40AO75400 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.53■■□□□ 1.2
PRPF40AO75400 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRPF40AO75400 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms