Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC26.92■■□□□ 1.9
BRD4O60885 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.92■■□□□ 1.9
BRD4O60885 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
BRD4O60885 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC26.92■■□□□ 1.9
BRD4O60885 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
BRD4O60885 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
BRD4O60885 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
BRD4O60885 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
BRD4O60885 AC010203.1-204ENST00000548782 407 ntBASIC26.92■■□□□ 1.9
BRD4O60885 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26.92■■□□□ 1.9
BRD4O60885 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
BRD4O60885 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.91■■□□□ 1.9
BRD4O60885 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.91■■□□□ 1.9
BRD4O60885 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC26.91■■□□□ 1.9
BRD4O60885 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
BRD4O60885 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
BRD4O60885 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC26.91■■□□□ 1.9
BRD4O60885 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.91■■□□□ 1.9
BRD4O60885 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
BRD4O60885 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD4O60885 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 AP000692.2-201ENST00000608391 879 ntBASIC26.9■■□□□ 1.9
BRD4O60885 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.9■■□□□ 1.9
BRD4O60885 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.9■■□□□ 1.9
BRD4O60885 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD4O60885 AC096733.2-201ENST00000609937 1394 ntBASIC26.9■■□□□ 1.9
BRD4O60885 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
BRD4O60885 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
BRD4O60885 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
BRD4O60885 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
BRD4O60885 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC26.89■■□□□ 1.9
BRD4O60885 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.89■■□□□ 1.9
BRD4O60885 AC104076.2-201ENST00000448912 469 ntBASIC26.89■■□□□ 1.9
BRD4O60885 AC128688.1-201ENST00000487626 519 ntBASIC26.89■■□□□ 1.9
BRD4O60885 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
BRD4O60885 AC006011.2-201ENST00000621313 1158 ntBASIC26.89■■□□□ 1.9
BRD4O60885 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
BRD4O60885 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC26.89■■□□□ 1.9
BRD4O60885 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
BRD4O60885 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
BRD4O60885 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
BRD4O60885 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.89
BRD4O60885 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
BRD4O60885 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC26.88■■□□□ 1.89
BRD4O60885 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
BRD4O60885 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC26.88■■□□□ 1.89
BRD4O60885 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.88■■□□□ 1.89
BRD4O60885 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.88■■□□□ 1.89
BRD4O60885 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC26.88■■□□□ 1.89
BRD4O60885 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC26.88■■□□□ 1.89
BRD4O60885 FAM87A-204ENST00000613235 858 ntBASIC26.88■■□□□ 1.89
BRD4O60885 AC009237.14-201ENST00000609975 1594 ntBASIC26.88■■□□□ 1.89
BRD4O60885 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
BRD4O60885 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
BRD4O60885 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.88■■□□□ 1.89
BRD4O60885 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
BRD4O60885 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
BRD4O60885 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
BRD4O60885 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
BRD4O60885 PHGDH-210ENST00000641115 1638 ntBASIC26.88■■□□□ 1.89
BRD4O60885 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
BRD4O60885 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
BRD4O60885 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.87■■□□□ 1.89
BRD4O60885 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC26.87■■□□□ 1.89
BRD4O60885 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC26.87■■□□□ 1.89
BRD4O60885 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
BRD4O60885 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
BRD4O60885 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
BRD4O60885 AC097488.1-201ENST00000507834 756 ntBASIC26.87■■□□□ 1.89
BRD4O60885 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.87■■□□□ 1.89
BRD4O60885 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.87■■□□□ 1.89
BRD4O60885 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
BRD4O60885 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.87■■□□□ 1.89
BRD4O60885 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC26.87■■□□□ 1.89
BRD4O60885 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC26.87■■□□□ 1.89
BRD4O60885 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
BRD4O60885 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms