Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
LCMT2O60294 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LCMT2O60294 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.6■□□□□ 0.57
LCMT2O60294 AC093484.2-201ENST00000580996 2166 ntBASIC18.6■□□□□ 0.57
LCMT2O60294 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.6■□□□□ 0.57
LCMT2O60294 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LCMT2O60294 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LCMT2O60294 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LCMT2O60294 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LCMT2O60294 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.6■□□□□ 0.57
LCMT2O60294 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCMT2O60294 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LCMT2O60294 LINC01465-201ENST00000408887 1940 ntBASIC18.59■□□□□ 0.57
LCMT2O60294 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.59■□□□□ 0.57
LCMT2O60294 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.59■□□□□ 0.57
LCMT2O60294 RARRES2P10-201ENST00000564312 460 ntBASIC18.59■□□□□ 0.57
LCMT2O60294 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.59■□□□□ 0.57
LCMT2O60294 HLA-A-209ENST00000638375 975 ntBASIC18.59■□□□□ 0.57
LCMT2O60294 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.59■□□□□ 0.57
LCMT2O60294 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
LCMT2O60294 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCMT2O60294 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.59■□□□□ 0.57
LCMT2O60294 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.59■□□□□ 0.57
LCMT2O60294 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LCMT2O60294 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LCMT2O60294 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
LCMT2O60294 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
LCMT2O60294 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LCMT2O60294 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LCMT2O60294 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LCMT2O60294 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LCMT2O60294 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCMT2O60294 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCMT2O60294 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.58■□□□□ 0.56
LCMT2O60294 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.58■□□□□ 0.56
LCMT2O60294 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.58■□□□□ 0.56
LCMT2O60294 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LCMT2O60294 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.58■□□□□ 0.56
LCMT2O60294 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.58■□□□□ 0.56
LCMT2O60294 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LCMT2O60294 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.58■□□□□ 0.56
LCMT2O60294 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.58■□□□□ 0.56
LCMT2O60294 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCMT2O60294 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.58■□□□□ 0.56
LCMT2O60294 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCMT2O60294 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.58■□□□□ 0.56
LCMT2O60294 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCMT2O60294 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCMT2O60294 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.58■□□□□ 0.56
LCMT2O60294 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 ZNF815P-204ENST00000434898 1737 ntBASIC18.57■□□□□ 0.56
LCMT2O60294 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LCMT2O60294 AC116562.4-201ENST00000641316 2276 ntBASIC18.57■□□□□ 0.56
LCMT2O60294 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.57■□□□□ 0.56
LCMT2O60294 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.57■□□□□ 0.56
LCMT2O60294 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.57■□□□□ 0.56
LCMT2O60294 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.57■□□□□ 0.56
LCMT2O60294 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.57■□□□□ 0.56
LCMT2O60294 Z99916.2-201ENST00000604037 246 ntBASIC18.57■□□□□ 0.56
LCMT2O60294 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.57■□□□□ 0.56
LCMT2O60294 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.57■□□□□ 0.56
LCMT2O60294 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LCMT2O60294 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.57■□□□□ 0.56
LCMT2O60294 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms